Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silene_20latifolia_20subsp._20alba_20[genbank_20GCA_5F001412135.1_20 2015-10-23] 307,720 sequences; 665,278,925 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq2352 80.6 4e-13 >seq2352 Length=18164 Score = 80.6 bits (88), Expect = 4e-13 Identities = 96/129 (74%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 102 AAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCCTT 161 || ||||| | |||| || || ||| || | || ||||| | ||| ||||| |||| Sbjct 8512 AATGCTTCCT-GTGGTATATCTACGGAACCAATGCGTTTCATTCTTTTCTTACCTTCCTT 8570 Query 162 TTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGTAC 221 ||||||||| |||||||| | ||| || || | ||||| || || ||||||||||| || Sbjct 8571 TTGCTTCTCCAGCAGCTTTCTCTTTCGACTAATATCACCACCATAACATTTGGCCAGAAC 8630 Query 222 GTTCTTTCT 230 || || || Sbjct 8631 ATTTTTCCT 8639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 839091158840