Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Silene_20latifolia_20subsp._20alba_20[genbank_20GCA_5F001412135.1_20
2015-10-23] 307,720 sequences; 665,278,925 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 4e-27
>seq1
Length=146306
Score = 127 bits (140), Expect = 4e-27
Identities = 178/245 (73%), Gaps = 11/245 (4%)
Strand=Plus/Plus
Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67
||||||||| ||| ||| | || ||| ||||| |||| || ||| | ||| ||
Sbjct 108133 ATGGTGGATACCTAGGCACCCAGAGACGAAGAAGGGCGTATTAATCGACGAAATGCTTCG 108192
Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127
|||||| | ||| | | | |||||| ||||| |||||| || |||| ||| |
Sbjct 108193 GGGAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGTCAACC------TTTCG 108245
Query 128 GTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAA 186
| ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| |
Sbjct 108246 AAC--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTA 108302
Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATG 246
|||| ||||||||||| ||| | ||||||| ||||| ||||||||||||||||
Sbjct 108303 CTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAAC 108362
Query 247 AGCCT 251
|||||
Sbjct 108363 AGCCT 108367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915573899520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |