Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silybum_20marianum_20[genbank_20GCA_5F001541825.1_202016-01-26] 258,575 sequences; 1,477,574,977 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq51173 78.8 6e-13 seq167234 77.0 2e-12 >seq51173 Length=2394 Score = 78.8 bits (86), Expect = 6e-13 Identities = 91/122 (75%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 19 ACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCC 78 |||| ||||||||| |||||||||||||||| || | || ||||| | |||||| Sbjct 1 ACGGCTACCTTGTTACGACTTCACCCCAGTCGCTAAACCCACCGTGGTCGCCTGCCTCCC 60 Query 79 --GAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTG 136 | ||||| | | |||| || | || |||||||||||||||||||||||||| Sbjct 61 TTGCGGGTTAGCGCAGCGCCTTCGGGTGAATCCAACTCCCATGGTGTGACGGGCGGTGTG 120 Query 137 TA 138 || Sbjct 121 TA 122 >seq167234 Length=6468 Score = 77.0 bits (84), Expect = 2e-12 Identities = 90/121 (74%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 20 CGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCC- 78 ||| ||||||||| |||||||||||||||| || | || ||||| | |||||| Sbjct 1 CGGCTACCTTGTTACGACTTCACCCCAGTCGCTAAACCCACCGTGGTCGCCTGCCTCCCT 60 Query 79 -GAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137 | ||||| | | |||| || | || ||||||||||||||||||||||||||| Sbjct 61 TGCGGGTTAGCGCAGCGCCTTCGGGTGAATCCAACTCCCATGGTGTGACGGGCGGTGTGT 120 Query 138 A 138 | Sbjct 121 A 121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 344762217000