Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silybum_20marianum_20[genbank_20GCA_5F001541825.1_202016-01-26] 258,575 sequences; 1,477,574,977 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq258574 87.8 2e-15 >seq258574 Length=4100 Score = 87.8 bits (96), Expect = 2e-15 Identities = 130/181 (72%), Gaps = 9/181 (5%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || ||||||| |||||||||| | ||||||||||| | ||| Sbjct 592 GGTGGATGCCTTGGCACTGAGAGGCGATGAAGGACGTGGCACGCTGCGAAAAGTCATGGG 651 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATA-TTGGAG 126 || || | | ||||||||| |||||||||||||| ||||| | || || Sbjct 652 GAGCTGCGAGCAAGCTTTGATCCGTGAATATCCGAATGGGGAAACCC-ACCTAGCAATAG 710 Query 127 ATATATCATAACG-----CTAGG--CGTTAGGCGAACGTGGGGAACTGAAACATCTAAGT 179 ||| || | | |||| | |||||||| ||||||||||||||||||||| Sbjct 711 GTATCCCAAACTGAATACATAGGTTTGGGAGGCGAACCCGGGGAACTGAAACATCTAAGT 770 Query 180 A 180 | Sbjct 771 A 771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475605642075