Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silybum_20marianum_20[genbank_20GCA_5F001541825.1_202016-01-26] 258,575 sequences; 1,477,574,977 total letters Query= AAMG01001250.1 Length=167 Score E Sequences producing significant alignments: (Bits) Value seq253477 89.7 4e-16 >seq253477 Length=3553 Score = 89.7 bits (98), Expect = 4e-16 Identities = 117/157 (75%), Gaps = 4/157 (3%) Strand=Plus/Minus Query 1 TCGACCCTAACCTGTGCACCCAGTGCGTCGGTCACTACGACGAACCGCAGAGCCAGCAGG 60 ||||||| | |||||||||| | ||||| || |||||||||||||| ||| ||||||||| Sbjct 1982 TCGACCCCAGCCTGTGCACCGAATGCGTGGGCCACTACGACGAACCACAGTGCCAGCAGG 1923 Query 61 TATCGCCCGGTGGATTCGCATTTCCGCTGGACGAGGCACACCCCGAGACGGAAGAGCAGT 120 | | ||||||| || | ||| | || || |||||| || ||||| | |||||| Sbjct 1922 TCT-GCCCGGTTGACT-GCA-TCCCCCTCGACGAGAATAACGTCGAGAGCAAGGAGCAG- 1867 Query 121 TTGATGGAGAAGTACCGCAAGATTACCGGTAAGGCCT 157 || ||| |||||| | | ||||| ||||||| Sbjct 1866 CTGCTGGCCAAGTACAAAGTGCTGACCGGCAAGGCCT 1830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434109847800