Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silybum_20marianum_20[genbank_20GCA_5F001541825.1_202016-01-26] 258,575 sequences; 1,477,574,977 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq13861 125 1e-26 >seq13861 Length=69252 Score = 125 bits (138), Expect = 1e-26 Identities = 190/267 (71%), Gaps = 9/267 (3%) Strand=Plus/Plus Query 9 TGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGGGAGAGTCC 68 ||||| ||| | || ||| || || ||||||| ||||||| || ||||| | |||| Sbjct 64722 TGTCCAAGGTCTTGCGTATCCGTTGGGCAAAATGGTAATTTGACATATTGGGATGGGTCC 64781 Query 69 GACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCTTGGTTACC 128 || ||| ||| |||| || |||| || || || || || || || ||||||| ||| Sbjct 64782 GAACCGGCGGTTCAAGTAGGGACATGTGGAGTTGACCTAGGGGACCGGTCCTTGGTCACC 64841 Query 129 GGGTCGGTTTATCAAGGGGCCCCACA-TGGGTTCTTCTTAGTAAATAACAACAAAAAGG- 186 || |||| || |||||| || ||||| | |||| || | | | | || | | || Sbjct 64842 GGTTCGGCTTTTCAAGGTGCACCACAATCGGTTTTTGTGA-TGGAGAAGACC-----GGC 64895 Query 187 -ATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGATTTGTG 245 | |||||| || ||||||| |||| | || || || ||||| |||||||| |||||| Sbjct 64896 CAAGGGCAATATGGTAAATTCGTAAAGGTGGACGTACCCGATGAGTTTTCTGGGTTTGTG 64955 Query 246 CAATCTGGATGCTGTGTGGAGATCTGA 272 ||||| || ||| || ||||| ||| Sbjct 64956 CAATCGGGTTGCCTCGTCGAGATTTGA 64982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 916025247200