Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sisymbrium_20irio_20[genbank_20GCA_5F000411075.1_202013-06-14] 21,357 sequences; 245,550,082 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq21279 96.9 6e-18 >seq21279 Length=97452 Score = 96.9 bits (106), Expect = 6e-18 Identities = 93/118 (79%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 201 AGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAA 260 ||||||||| | ||||| || |||||||||||||||||||||||||| ||||| || Sbjct 7637 AGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAA 7578 Query 261 CTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | ||||| |||| || ||| ||| |||| |||||||| |||| || |||| ||| Sbjct 7577 CAACTGCAAAAGAATTTGCCACAGATCTTTTTATTAATCA-AGAACAAAGGTTAAGGG 7521 Score = 89.7 bits (98), Expect = 9e-16 Identities = 103/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||| | ||| || |||| |||||||| || | |||| | |||||||||||| Sbjct 14345 CTGTTACTTTGGAGAAACTATAGTGCTCAAAGCAAGCTTACGCTCTGTATACATTAGCAT 14286 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||| | |||||| | | | ||||| |||||| | ||| | |||||||| Sbjct 14285 GGAATAACATCATAGGA-TTTTGATCCTATTGTGTTGGCCTTCGGGATCAGAGTAATGAT 14227 Query 191 TAATAGGGATAGTCGG 206 ||| ||||| |||||| Sbjct 14226 TAAAAGGGACAGTCGG 14211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915004540736