Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sisymbrium_20irio_20[genbank_20GCA_5F000411075.1_202013-06-14] 21,357 sequences; 245,550,082 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq21279 237 3e-60 >seq21279 Length=97452 Score = 237 bits (262), Expect = 3e-60 Identities = 199/243 (82%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 18 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 77 |||||||||||| || |||| |||||||||||||||||||||||| |||||||||||||| Sbjct 7034 AGTGTAGCGCGCATGTGGCCTAGAACATCTAAGGGCATCACAGACTTGTTATTGCCTCAA 7093 Query 78 ACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA--TAGTCG 135 |||||| || || | | | ||| |||||||||||| || || | | || Sbjct 7094 ACTTCCTTTACCTAAATGGCTATATTCCCTCTAAGAAACCGGCTGTGGAGGGATTCCTCC 7153 Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 | | |||| |||||||| | ||||||||||||||| ||||||||||||||||||| || Sbjct 7154 ACGAAGCTAATTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATTGCT 7213 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||| |||||| |||||||||||||||| ||| ||||||||||||||||||| | | ||| Sbjct 7214 CCACTAACTAATAACGGCCATGCACCACAACCTATAGAATCAAGAAAGAGCTCTTAGTCT 7273 Query 256 GTC 258 ||| Sbjct 7274 GTC 7276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796635145317