Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sisymbrium_20irio_20[genbank_20GCA_5F000411075.1_202013-06-14] 21,357 sequences; 245,550,082 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq18196 104 8e-20 seq19420 75.2 4e-11 >seq18196 Length=13440 Score = 104 bits (114), Expect = 8e-20 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 48 GTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACT 107 |||||||| | ||| ||||||||||| | ||| | || |||||||||||||| ||| Sbjct 4653 GTGATCTATCTATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACT 4594 Query 108 AATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 |||||||||||| || ||||||| ||||| ||||||||||| || Sbjct 4593 GATGTTGAAAAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 4549 >seq19420 Length=126316 Score = 75.2 bits (82), Expect = 4e-11 Identities = 64/79 (81%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 109 ATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAA 168 |||||||||||| || ||||||| ||||| ||||||||||| || | | ||| || Sbjct 105462 ATGTTGAAAAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGC 105403 Query 169 TAGCTGGTTCTCTCCGAAA 187 |||||||||||| |||||| Sbjct 105402 TAGCTGGTTCTCCCCGAAA 105384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689239152128