Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sisymbrium_20irio_20[genbank_20GCA_5F000411075.1_202013-06-14] 21,357 sequences; 245,550,082 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq20271 89.7 7e-13 >seq20271 Length=78964 Score = 89.7 bits (98), Expect = 7e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 162616 GGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATC 162675 || || || ||||| ||||| | ||| |||| |||| || || || || ||||| Sbjct 42857 GGGATCCTGTTCAACCACGAGTCACCCCGCCGAGGCGAGAACTTTGTGACTCGGAAGATA 42798 Query 162676 GTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCTC 162735 || |||||| | || | || ||||| || | | || || |||||| | Sbjct 42797 ACTCGGGCCTTGGGAAGGATCAAGGTCGGACTGCAGACCAAGCTCTTCCTCGGAAACATA 42738 Query 162736 AATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTT 162795 | || | | ||||||||| ||| |||||||| |||||||||||| | ||||| Sbjct 42737 CAGGCGTCAAGAGACTGGGGATTCGCAGGGGACTACGTGGAGGCTATGTGGCTCATGCTC 42678 Query 162796 CAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTG 162832 ||||| || || ||||||||||| ||| ||||||||| Sbjct 42677 CAGCAGGACAAACCAGATGATTACGTGGTCGCAACTG 42641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691274606323320