Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20americanum_20[genbank_20GCA_5F900188915.1_202017-07-22] 837 sequences; 9,013,692 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq433 82.4 1e-13 seq83 82.4 1e-13 >seq433 Length=22214 Score = 82.4 bits (90), Expect = 1e-13 Identities = 208/309 (67%), Gaps = 8/309 (3%) Strand=Plus/Minus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATT-CG 70 |||| |||||||||| | |||| ||| || ||||| || |||| ||| | | Sbjct 8865 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAG--GAGCCAGGGCT 8808 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||| |||||||| ||| | |||||||| ||| | | | | || || |||||||| Sbjct 8807 CTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGG 8749 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | ||| ||||| || ||||||||| ||| | ||||| | || || Sbjct 8748 GAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTA 8693 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | ||| Sbjct 8692 TGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGG 8633 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||| |||||||| | |||||| | | ||||||| | | || ||||||||||| || Sbjct 8632 AGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 8573 Query 311 CAATCAAAC 319 || || ||| Sbjct 8572 CACTCGAAC 8564 >seq83 Length=41462 Score = 82.4 bits (90), Expect = 1e-13 Identities = 208/309 (67%), Gaps = 8/309 (3%) Strand=Plus/Plus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATT-CG 70 |||| |||||||||| | |||| ||| || ||||| || |||| ||| | | Sbjct 25344 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAG--GAGCCAGGGCT 25401 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||| |||||||| ||| | |||||||| ||| | | | | || || |||||||| Sbjct 25402 CTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGG 25460 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | ||| ||||| || ||||||||| ||| | ||||| | || || Sbjct 25461 GAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTA 25516 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | ||| Sbjct 25517 TGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGG 25576 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||| |||||||| | |||||| | | ||||||| | | || ||||||||||| || Sbjct 25577 AGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 25636 Query 311 CAATCAAAC 319 || || ||| Sbjct 25637 CACTCGAAC 25645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972791857664