Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20americanum_20[genbank_20GCA_5F900188915.1_202017-07-22]
837 sequences; 9,013,692 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq83 230 6e-58
seq433 217 4e-54
>seq83
Length=41462
Score = 230 bits (254), Expect = 6e-58
Identities = 297/409 (73%), Gaps = 2/409 (0%)
Strand=Plus/Plus
Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62
|| ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| |||
Sbjct 21587 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 21646
Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122
|||||||| |||||| | |||||||||||||| | ||| || | | |||| | | ||
Sbjct 21647 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 21706
Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182
||||||| ||||| |||| ||| || | | ||| | || |||| | ||
Sbjct 21707 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 21766
Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242
|| | |||||| | ||| ||| |||||||||||||| || | | ||||||||| ||
Sbjct 21767 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 21826
Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302
|||| ||| | ||||| |||||||| || | |||||||| ||||||| || |
Sbjct 21827 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 21886
Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362
|||||||||||| ||||||| ||| |||||||| ||||| | || | | |
Sbjct 21887 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGA 21946
Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409
|| || || ||||||||||||| |||| ||||||||||| |||
Sbjct 21947 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 21995
>seq433
Length=22214
Score = 217 bits (240), Expect = 4e-54
Identities = 297/411 (72%), Gaps = 4/411 (1%)
Strand=Plus/Minus
Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGT-GCCAGCAGCCGCGGTAATACGTAGGGTG 61
|| ||| ||||||||| ||||||||| || |||||||||||||||||||| ||| ||
Sbjct 12645 TATCTGGGGAATAAGCATCGGCTAACTCTGTTGCCAGCAGCCGCGGTAATACAGAGGATG 12586
Query 62 CAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTG 121
||||||||| |||||| | |||||||||||||| | ||| || | | |||| | | |
Sbjct 12585 CAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCG 12526
Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAG 181
| ||||||| ||||| |||| ||| || | | ||| | || |||| | ||
Sbjct 12525 TCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAG 12466
Query 182 AGGGGGGTGGAATTCCACG-TGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAAT 240
|| | |||||| || || ||| |||||||||||||| || | | |||||||||
Sbjct 12465 GGGCAGAGGGAATTTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAAC 12406
Query 241 GGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAAC 300
|||||| ||| | ||||| |||||||| || | |||||||| ||||||| ||
Sbjct 12405 GGCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAAT 12346
Query 301 AGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTA 360
||||||||||||| ||||||| ||| |||||||| ||||| | || | | |
Sbjct 12345 GGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATC 12286
Query 361 CTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409
|| || || ||||||||||||| |||| ||||||||||| |||
Sbjct 12285 GACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 12235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289589206048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |