Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20americanum_20[genbank_20GCA_5F900188915.1_202017-07-22] 837 sequences; 9,013,692 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq83 484 2e-134 seq433 473 4e-131 seq364 77.0 1e-11 >seq83 Length=41462 Score = 484 bits (536), Expect = 2e-134 Identities = 408/497 (82%), Gaps = 3/497 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 21993 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 22052 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 22053 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 22112 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | || |||||| || | ||||||| ||||||| ||||||||| Sbjct 22113 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 22170 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || ||||||||||||||||||||||||||||||||| | |||||||| Sbjct 22171 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 22230 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 |||| || |||| || || || | |||||||||||| || ||||||||||||| ||| Sbjct 22231 CATCGTTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 22290 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 22291 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 22350 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| |||||||| ||| || |||| ||| || |||||||||||||| Sbjct 22351 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACCCCAAAAACCCGTCCTCAGTTCGGATTG 22410 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 22411 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 22470 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 22471 CGGTGAATTCGTTCCCG 22487 >seq433 Length=22214 Score = 473 bits (524), Expect = 4e-131 Identities = 408/499 (82%), Gaps = 5/499 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 12237 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 12178 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAAT-CTTGACATCCTCTGACCCCT 119 |||||||||||||| |||| ||||||||||||||||| |||||||| | || ||| Sbjct 12177 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAAGGGCTTGACATGCCGCGAATCCT 12118 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCA 179 || || | ||||| | || |||||| || | ||||||| ||||||| |||||||| Sbjct 12117 CTTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGTCA 12060 Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT- 238 ||||||| ||| || ||||||||||||||||||||||||||||||||| | |||||| Sbjct 12059 GCTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTT 12000 Query 239 GCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298 |||||| || |||| || || || | |||||||||||| || |||||| |||||| || Sbjct 11999 GCCATCGTTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGKAAGGTGAGG 11940 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 | |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | Sbjct 11939 ATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGG 11880 Query 359 ACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGAT 418 |||||||| |||| |||||||| ||| || |||| ||| || |||||||||||| Sbjct 11879 ACAAAGGGTCGCGATCCCGCGAGGGTGAGCTAACCCCAAAAACCCGTCCTCAGTTCGGAT 11820 Query 419 TGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGC 477 || || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 11819 TGCAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATAC 11760 Query 478 TACGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 11759 GGCGGTGAATTCGTTCCCG 11741 >seq364 Length=14758 Score = 77.0 bits (84), Expect = 1e-11 Identities = 73/92 (79%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 404 GTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATC 463 || ||||||||| |||| || |||||||||| || ||||||| ||||||||||||||| Sbjct 2446 GTCCTCAGTTCGAATTGCAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATT 2387 Query 464 GTAGATCAG-CATGCTACGGTGAATACGTTCC 494 | | ||| ||| |||||||| |||||| Sbjct 2386 GCCGGCCAGCCATAGGGCGGTGAATTCGTTCC 2355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503987411520