Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20americanum_20[genbank_20GCA_5F900188915.1_202017-07-22]
837 sequences; 9,013,692 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq83 484 2e-134
seq433 473 4e-131
seq364 77.0 1e-11
>seq83
Length=41462
Score = 484 bits (536), Expect = 2e-134
Identities = 408/497 (82%), Gaps = 3/497 (1%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 21993 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 22052
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||||||||||||| |||| |||||||||||||||| |||||||| | || ||||
Sbjct 22053 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 22112
Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180
| || | ||||| | || |||||| || | ||||||| ||||||| |||||||||
Sbjct 22113 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 22170
Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240
|||||| ||| || ||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 22171 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 22230
Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300
|||| || |||| || || || | |||||||||||| || ||||||||||||| |||
Sbjct 22231 CATCGTTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 22290
Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360
|||||||| ||||||||||||||||| ||||| |||||||||||||||||| | ||
Sbjct 22291 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 22350
Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420
|||||| |||| |||||||| ||| || |||| ||| || ||||||||||||||
Sbjct 22351 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACCCCAAAAACCCGTCCTCAGTTCGGATTG 22410
Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479
|| |||||||||| || ||||||| ||||||||||||||||| | |||| ||| |
Sbjct 22411 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 22470
Query 480 CGGTGAATACGTTCCCG 496
|||||||| ||||||||
Sbjct 22471 CGGTGAATTCGTTCCCG 22487
>seq433
Length=22214
Score = 473 bits (524), Expect = 4e-131
Identities = 408/499 (82%), Gaps = 5/499 (1%)
Strand=Plus/Minus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 12237 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 12178
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAAT-CTTGACATCCTCTGACCCCT 119
|||||||||||||| |||| ||||||||||||||||| |||||||| | || |||
Sbjct 12177 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAAGGGCTTGACATGCCGCGAATCCT 12118
Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCA 179
|| || | ||||| | || |||||| || | ||||||| ||||||| ||||||||
Sbjct 12117 CTTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGTCA 12060
Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT- 238
||||||| ||| || ||||||||||||||||||||||||||||||||| | ||||||
Sbjct 12059 GCTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTT 12000
Query 239 GCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298
|||||| || |||| || || || | |||||||||||| || |||||| |||||| ||
Sbjct 11999 GCCATCGTTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGKAAGGTGAGG 11940
Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358
| |||||||| ||||||||||||||||| ||||| |||||||||||||||||| |
Sbjct 11939 ATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGG 11880
Query 359 ACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGAT 418
|||||||| |||| |||||||| ||| || |||| ||| || ||||||||||||
Sbjct 11879 ACAAAGGGTCGCGATCCCGCGAGGGTGAGCTAACCCCAAAAACCCGTCCTCAGTTCGGAT 11820
Query 419 TGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGC 477
|| || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| |
Sbjct 11819 TGCAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATAC 11760
Query 478 TACGGTGAATACGTTCCCG 496
|||||||| ||||||||
Sbjct 11759 GGCGGTGAATTCGTTCCCG 11741
>seq364
Length=14758
Score = 77.0 bits (84), Expect = 1e-11
Identities = 73/92 (79%), Gaps = 1/92 (1%)
Strand=Plus/Minus
Query 404 GTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATC 463
|| ||||||||| |||| || |||||||||| || ||||||| |||||||||||||||
Sbjct 2446 GTCCTCAGTTCGAATTGCAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATT 2387
Query 464 GTAGATCAG-CATGCTACGGTGAATACGTTCC 494
| | ||| ||| |||||||| ||||||
Sbjct 2386 GCCGGCCAGCCATAGGGCGGTGAATTCGTTCC 2355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503987411520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |