Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20americanum_20[genbank_20GCA_5F900188915.1_202017-07-22] 837 sequences; 9,013,692 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq83 264 4e-68 seq433 259 2e-66 >seq83 Length=41462 Score = 264 bits (292), Expect = 4e-68 Identities = 345/470 (73%), Gaps = 28/470 (6%) Strand=Plus/Minus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 25687 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 25628 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| || Sbjct 25627 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 25568 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314 | |||| |||||| |||| |||||||||||||| | ||||||| | | | | ||| Sbjct 25567 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 25508 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370 || | ||||||| |||||||||||||||||||| || || |||| Sbjct 25507 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 25455 Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429 || || ||| | | | |||| |||||||||||||| |||||||| |||| | Sbjct 25454 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA---GAG 25400 Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489 ||| ||| | |||| || | ||| || | ||||||| || ||||||||| Sbjct 25399 CCCT----GGCTC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 25349 Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549 |||||| ||||| ||||||||| ||||||||||||||| | |||||||||||||| | Sbjct 25348 TCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCA 25289 Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 ||||||||||| ||| |||||||| | |||||||||| ||| || Sbjct 25288 GGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 25239 >seq433 Length=22214 Score = 259 bits (286), Expect = 2e-66 Identities = 345/471 (73%), Gaps = 29/471 (6%) Strand=Plus/Plus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 8522 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 8581 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| || Sbjct 8582 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 8641 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314 | |||| |||||| |||| |||||||||||||| | ||||||| | | | | ||| Sbjct 8642 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 8701 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370 || | ||||||| |||||||||||||||||||| || || |||| Sbjct 8702 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 8754 Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429 || || ||| | | | |||| |||||||||||||| |||||||| |||| | Sbjct 8755 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA---GAG 8809 Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489 ||| ||| | |||| || | ||| || | ||||||| || ||||||||| Sbjct 8810 CCCT----GGCTC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 8860 Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549 |||||| ||||| ||||||||| ||||||||||||||| | |||||||||||||| | Sbjct 8861 TCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCA 8920 Query 550 GGAGT-ATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 ||||| |||||| ||| |||||||| | |||||||||| ||| || Sbjct 8921 GGAGTAATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 8971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817584786688