Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20americanum_20[genbank_20GCA_5F900188915.1_202017-07-22]
837 sequences; 9,013,692 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq83 163 5e-38
seq433 154 2e-35
>seq83
Length=41462
Score = 163 bits (180), Expect = 5e-38
Identities = 207/285 (73%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| |||||||| |
Sbjct 21871 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 21812
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||||||||||||||| ||| | |||||| |||| || | | |||| ||
Sbjct 21811 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 21752
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| || | |||||
Sbjct 21751 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 21692
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||||||||||||||| ||| ||||||
Sbjct 21691 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTA 21632
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 21631 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 21587
>seq433
Length=22214
Score = 154 bits (170), Expect = 2e-35
Identities = 209/288 (73%), Gaps = 4/288 (1%)
Strand=Plus/Plus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| |||||||| |
Sbjct 12359 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 12418
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAA--TTCCGATTGCCTCTCCAGCACTCA 123
| || |||||||||||||||||| ||| ||||| |||| |||| || | | ||||
Sbjct 12419 CCGATCTCTACGCATTTCACCGCTCCAC-CGGAAAATTCCCTCTGCCCCTACCGTACTCC 12477
Query 124 AGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGC 183
|| |||||| | || | ||||||||||| | ||| || | |||||
Sbjct 12478 AGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAA 12537
Query 184 CTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTAT 243
|| |||||| | |||||| |||||| | |||||||||||||||| ||| ||||
Sbjct 12538 AAAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTAT 12597
Query 244 TACCGCGGCTGCTGGC-ACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||| || ||||||||| ||||||||| ||| ||
Sbjct 12598 TACCGCGGCTGCTGGCAACAGAGTTAGCCGATGCTTATTCCCCAGATA 12645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828793279727
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |