Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20americanum_20[genbank_20GCA_5F900188915.1_202017-07-22]
837 sequences; 9,013,692 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq83 277 4e-72
seq433 264 3e-68
>seq83
Length=41462
Score = 277 bits (306), Expect = 4e-72
Identities = 306/405 (76%), Gaps = 2/405 (0%)
Strand=Plus/Plus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|| ||| |||| ||||||||| |||||||||||||||||||||| ||| || |||
Sbjct 21591 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGC 21650
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || ||||||| | || |||
Sbjct 21651 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAA 21710
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||||||||| || || | |||||| | ||| |||| | | |||||||
Sbjct 21711 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 21770
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| | ||| |||||||||||||||||| || | | |||||||| ||||||
Sbjct 21771 GAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAA 21830
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | | |||||||||||| ||||||| ||||||| || |||||
Sbjct 21831 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATT 21890
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363
|||||||| ||||||| ||||||||||||| |||||||| | | | ||| || |
Sbjct 21891 AGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCC 21949
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||||| || |||||||||||
Sbjct 21950 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 21994
>seq433
Length=22214
Score = 264 bits (292), Expect = 3e-68
Identities = 306/407 (75%), Gaps = 4/407 (1%)
Strand=Plus/Minus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGT-GCCAGCAGCCGCGGTAATACGTAGGGGGCTAG 63
|| ||| |||| ||||||||| || |||||||||||||||||||| ||| || ||
Sbjct 12641 TGGGGAATAAGCATCGGCTAACTCTGTTGCCAGCAGCCGCGGTAATACAGAGGATGCAAG 12582
Query 64 CGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAA 123
||||||||||||| | ||||||||||| || |||||||| || ||||||| | || ||
Sbjct 12581 CGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAA 12522
Query 124 AGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGC 183
| | | |||||||||| || || | |||||| | ||| |||| | | ||||||
Sbjct 12521 ATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGC 12462
Query 184 AAGTGGAATTC-CTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCG 242
| |||||| | ||| |||||||||||||||||| || | | |||||||| ||||
Sbjct 12461 AGAGGGAATTTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCG 12402
Query 243 AAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGA 302
|| || |||||| | | |||||||||||| ||||||| ||||||| || |||
Sbjct 12401 AAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGA 12342
Query 303 TTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAG 361
|||||||||| ||||||| ||||||||||||| |||||||| | | | ||| || |
Sbjct 12341 TTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGAC 12283
Query 362 TGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||||| || |||||||||||
Sbjct 12282 CCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 12236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203189929216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |