Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq18177 123 1e-26 seq34975 122 5e-26 seq25373 122 5e-26 seq25376 118 6e-25 seq34365 114 7e-24 seq33847 114 7e-24 seq40805 107 1e-21 seq37727 107 1e-21 seq32980 107 1e-21 seq22141 107 1e-21 seq38140 100 2e-19 seq28156 89.7 3e-16 seq38830 82.4 4e-14 seq15482 77.0 2e-12 seq45364 75.2 6e-12 >seq18177 Length=26406 Score = 123 bits (136), Expect = 1e-26 Identities = 97/117 (83%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| ||||||| || ||||| || |||||| | Sbjct 9824 GAACCCAAAAACTTTGATTTCTCATAAGGTGTCGGCGGAGTCCTAAAAGCAACATCCGCY 9765 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 9764 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 9708 >seq34975 Length=8356 Score = 122 bits (134), Expect = 5e-26 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCAAAATGATAACATCGCC 59 ||||||||| ||||||||||||| ||| |||||| ||| |||| ||| |||||| | Sbjct 2231 GAACCCAAAAACTTTGATTTCTCATAAAGTGCCG-GCGAAGTCCTAATAGCAACATCCGC 2289 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| |||||||| |||| |||| |||||| |||||||||| ||||||||||| Sbjct 2290 CGATCCCTGGTCGGCATCVTTTATGGTTGAGACTAGGACGGTATCTTATCGTCTTCGA 2347 >seq25373 Length=6275 Score = 122 bits (134), Expect = 5e-26 Identities = 97/117 (83%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| ||||||||||| |||| || |||||| || Sbjct 4759 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGACGAAGTCCTAAAAGCAACATCCGCC 4818 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||| || |||||||| Sbjct 4819 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTTATAGTCTTCGA 4875 >seq25376 Length=19113 Score = 118 bits (130), Expect = 6e-25 Identities = 96/117 (82%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| ||||||| || ||||| || |||||| || Sbjct 16368 GAACCCAAAAACTTTGATTTCTCATAAGGTGTCGGCGGAGTCCTAAAAGCAACATCCGCC 16427 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| | ||| |||| |||||| |||||||| ||||||||||||| Sbjct 16428 GATCCCTGGTCGGCATCGYTTATGGTTGAGACTAGGACGGTATATGATCGTCTTCGA 16484 Score = 114 bits (126), Expect = 7e-24 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||| ||||||||| ||||| || |||||| || Sbjct 4814 GAACCCAAAATCTTTGATTTCTCATAAGGTGCCRGCGGAGTCCTAAAAGCAACATCCACC 4873 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| | ||| |||| |||||| |||||||| ||||||||||||| Sbjct 4874 GATCCCTGGTCGGCATCGCTTATGGTTGAGACTAGGACGGTATATGATCGTCTTCGA 4930 >seq34365 Length=4201 Score = 114 bits (126), Expect = 7e-24 Identities = 98/119 (82%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC--AAAATGATAACATCGC 58 ||||||||| ||||||||||||| |||||||||| ||||| ||||| |||||| Sbjct 1004 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAT--CAACATCCG 1061 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | |||||| |||||||| ||||| |||| |||||| ||| |||||||||| ||||||| Sbjct 1062 CATATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACAGTATCTGATCATCTTCGA 1120 >seq33847 Length=15204 Score = 114 bits (126), Expect = 7e-24 Identities = 88/105 (84%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 13 TTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCG 72 |||||||||| |||||||||| ||||| || |||||| |||||||||||||| Sbjct 10808 TTTGATTTCTYCTAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCCGATCCCTAGTCG 10749 Query 73 GCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 10748 GCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 10704 >seq40805 Length=5201 Score = 107 bits (118), Expect = 1e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| | ||||||||||| | |||||||| ||||| || |||||| || Sbjct 2361 GAACCCAAAAATTTTGATTTCTCATTAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 2302 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| |||| |||| | |||| ||||||||||||||||||| || Sbjct 2301 GATCCCTGGTCGGCATCATTTATGGTTGATACTAGGACGGTATCTGATCGTCTTTGA 2245 >seq37727 Length=7427 Score = 107 bits (118), Expect = 1e-21 Identities = 95/116 (82%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA-AAATGATAACATCGCC 59 || |||||| ||||||||||||| |||||||||| ||||| ||| || |||||| | Sbjct 5271 GATCCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGA-AACATCAGC 5213 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||| ||| |||||||| |||| |||| |||||| || ||||| ||||||||||| Sbjct 5212 CGATACCTGGTCGGCATCATTTATGGTTGAGACTAGGAAGGTATATGATCGTCTTC 5157 >seq32980 Length=6790 Score = 107 bits (118), Expect = 1e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| | ||| || |||||| | Sbjct 270 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGTGGTGTCCTAAAAGCAACATCCGTC 211 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| ||||| || ||| |||| |||||| |||||||||||||||||||||| Sbjct 210 GATCCCTGGTCGGTATCATTTCTGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 154 >seq22141 Length=17924 Score = 107 bits (118), Expect = 1e-21 Identities = 96/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCAAAATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||| ||| ||| |||| || |||||| Sbjct 11826 GAACCCAAAAACTTTGATTTCTCATAAGGTACCG-GCGTAGTCCTAAAAGCAACATCAGT 11884 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | |||||| |||||||| ||||| |||| |||||| ||| |||||| ||||||||||| Sbjct 11885 CTATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACAGTATCTAATCGTCTTCGA 11942 >seq38140 Length=1686 Score = 100 bits (110), Expect = 2e-19 Identities = 93/117 (79%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||| | ||||||||||| |||| |||||| ||||| || |||||| || Sbjct 203 GAACCCAATAATTTTGATTTCTCATAAG-TGCCGACGGAGTCCTAAAAGCAACATCCGCC 261 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| |||| ||| |||||| |||||||||||||||| || || Sbjct 262 GATCCCTTGTCGGCATCATTTATGGTCGAGACTAGGACGGTATCTGATCGTGTTTGA 318 >seq28156 Length=27067 Score = 89.7 bits (98), Expect = 3e-16 Identities = 92/118 (78%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCAAAATGATAACATCGCC 59 ||||||||| | ||||||||||| |||||||||| ||| |||| | ||||| | Sbjct 7526 GAACCCAAAAAATTTGATTTCTCATAAGGTGCCG-GCGAAGTCCTGAGAGCAACATTCGC 7468 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| ||| ||| |||| |||| |||||| |||| ||| |||||||||| || Sbjct 7467 CGATCCCTGGTCAACATCATTTATGGTTGAGACTAGGACGATATATGATCGTCTTTGA 7410 >seq38830 Length=3615 Score = 82.4 bits (90), Expect = 4e-14 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| | ||||||||||| |||||||||| ||||| || |||||| || Sbjct 3364 GAACCCAAAAATTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 3423 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAG 90 ||||||| |||||||| ||||| |||| || Sbjct 3424 GATCCCTGGTCGGCATCGTTTATGGTTGAG 3453 Score = 75.2 bits (82), Expect = 6e-12 Identities = 62/76 (82%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| ||||| || |||||| || Sbjct 3538 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 3597 Query 61 GATCCCTAGTCGGCAT 76 ||||||| |||||||| Sbjct 3598 GATCCCTGGTCGGCAT 3613 >seq15482 Length=22684 Score = 77.0 bits (84), Expect = 2e-12 Identities = 70/89 (79%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 6 CAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCC 65 |||| ||||||||||||| ||||||| || ||||| || |||||| | ||||| Sbjct 7608 CAAAAACTTTGATTTCTCATAAGGTGYCGGCGGAGTCCTAAAAGCAACATCCGCGGATCC 7667 Query 66 CTAGTCGGCATAGTTTACGGTTAAGACTA 94 || |||||||| ||||| |||| |||||| Sbjct 7668 CTGGTCGGCATCGTTTATGGTTGAGACTA 7696 >seq45364 Length=1267 Score = 75.2 bits (82), Expect = 6e-12 Identities = 90/120 (75%), Gaps = 3/120 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGA-TAACATCG 57 ||||||||| |||||| |||| || ||| | || ||||||| |||| | | || | Sbjct 547 GAACCCAAAAACTTTGGTTTCCCGGAAGCTTCCATTCGAGTCATGAAATTAGTTACTCAG 488 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| || || ||||| ||||| ||||| |||| | ||||||||||||| |||||| Sbjct 487 AATGATCGCTGGTTGGCATCGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTTCGA 428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278278389660