Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq40995 131 2e-28 seq3702 127 3e-27 seq7769 100 4e-19 seq2949 100 4e-19 seq33171 98.7 1e-18 seq910 98.7 1e-18 seq34284 96.9 5e-18 seq24435 96.9 5e-18 seq20002 87.8 2e-15 seq9020 87.8 2e-15 seq8261 87.8 2e-15 seq21199 86.0 9e-15 seq30764 82.4 1e-13 seq27942 77.0 5e-12 seq16583 77.0 5e-12 >seq40995 Length=1634 Score = 131 bits (144), Expect = 2e-28 Identities = 173/243 (71%), Gaps = 20/243 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||| ||||| || |||| || |||||| | ||||| | ||| | |||| Sbjct 673 CCTTCCAGCACTGGGCAAGCTTCAGCCCCCATACATGGTCTTAC-GACTTTGTGGAGACC 731 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 732 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCGCCT------------- 778 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || | || |||||||||||||||||||||||||||| |||||| ||| ||||| Sbjct 779 TTGT------GAAGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGYCGAGTTCCT 832 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| ||| |||||||||||| | Sbjct 833 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAYCTGTGTCGGTTTCGG 892 Query 246 GTA 248 ||| Sbjct 893 GTA 895 >seq3702 Length=28645 Score = 127 bits (140), Expect = 3e-27 Identities = 171/237 (72%), Gaps = 12/237 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||| ||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 9768 CCTTCCAGCACCGGGYAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 9826 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| || || | | ||| | | | |||| | Sbjct 9827 TGTGTTTTTAATAAACAGTCGCTAYCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 9884 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 9885 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 9935 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 | || |||| | | | || | |||||| || ||| || |||| |||||| ||| Sbjct 9936 TCGACATGGTTCTCTCAAGCGTCCTAGTATACTTTACTTGTTCACCAGTGTCGATTT 9992 >seq7769 Length=43656 Score = 100 bits (110), Expect = 4e-19 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 143 CACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCG 202 |||| |||||||||||||||||||| ||||||||||| |||||| || |||| | | Sbjct 13469 CACCGCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTCA 13528 Query 203 AACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 | |||| | |||| |||||| || ||||||||||||||| Sbjct 13529 AGCGCCCTTGTATACTCTACTTGTTCACCTGTGTCGGTTT 13568 >seq2949 Length=88002 Score = 100 bits (110), Expect = 4e-19 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||| ||||||||||||| ||||| |||| ||||||| | |||| | Sbjct 44984 GGCACCCCTTCTCCTGAAGTTACGGGGCTATTTTTCCGAGTTCCTTAGAGAGAGTTGTCT 44925 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || | ||| ||||||||||||| | |||||||||||||| |||| Sbjct 44924 CGCGCCCCTAGGTATTCTCTACCTACCAACCTGTGTCGGTTTCGGGTA 44877 >seq33171 Length=8894 Score = 98.7 bits (108), Expect = 1e-18 Identities = 171/245 (70%), Gaps = 24/245 (10%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| || |||| |||||||| || ||||||| | ||||| ||| ||| |||| Sbjct 2901 CCTTCCGGCATTGGGCTGGCGTCAGCCCATATACATGGTCTTACAA-CTTTGCAGAGACC 2959 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 2960 TGTGTTTTTGGTAAACAGTCGCCCGAGCCTGGTCACTGCGACCCCCT------------- 3006 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || |||||||||||| | | |||||||| | |||||||||| | ||| Sbjct 3007 TTGTA----AGGAG--GCACCCCTTCTCTCAATGTTACGGGTCTATTTTGCCGAGTACCT 3060 Query 186 TAACCACAGTTCACCCGAACGCCT-TA-GTATTCTCTACCTGACCACCTGTGTCGGTTTA 243 || | |||| | || ||||| || ||||||||||| | |||| |||||| |||| Sbjct 3061 TAGAGAGAGTTGTCTCG--CGCCTCTAGGTATTCTCTACGTACCCACTTGTGTCAGTTTT 3118 Query 244 CGGTA 248 |||| Sbjct 3119 GGGTA 3123 >seq910 Length=18343 Score = 98.7 bits (108), Expect = 1e-18 Identities = 126/171 (74%), Gaps = 12/171 (7%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 5577 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACC-ACTTAGCAGAGTCC 5519 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | || |||| | Sbjct 5518 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGC--CGCTTTCCTAATCAAAAGA 5461 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176 | || || |||||||||||||||||||||||||| |||||||| Sbjct 5460 T--------AGRAG-AGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGC 5419 >seq34284 Length=8669 Score = 96.9 bits (106), Expect = 5e-18 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 ||||||| |||||||||||||||| ||| |||||||||| ||||||| | |||| | Sbjct 5748 GGCACCCTTTCTCCCGAAGTTACGAGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 5807 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || | ||| ||||||||||||| |||| |||||| |||| |||| Sbjct 5808 CGCGCCCCTAGGTATTCTCTACCTACCCACTTGTGTCAGTTTCGGGTA 5855 >seq24435 Length=18177 Score = 96.9 bits (106), Expect = 5e-18 Identities = 131/181 (72%), Gaps = 12/181 (7%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| |||||| |||| ||||| | |||||||| ||||| ||| ||| | || Sbjct 4701 CCTTCCAGCACCGGSCAGGTGTCAGACTCTATACATCATGTTACC-ACTTAGCAGAGTCC 4759 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| | |||| | | ||| | || |||| | Sbjct 4760 CGTGTTTTTAATAAACAGTCGCTACTCTCTGGTATGTGCAGC--TTTCCTAATCAAAAGA 4817 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | | || |||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 4818 TGG-----GAG----AGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 4868 Query 186 T 186 | Sbjct 4869 T 4869 >seq20002 Length=41097 Score = 87.8 bits (96), Expect = 2e-15 Identities = 147/210 (70%), Gaps = 12/210 (6%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 5052 CCTTCCTGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACC-ACTTAGCAGAGTCC 4994 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||| ||||| ||| || | | ||| | || |||| | Sbjct 4993 TGTGTTTTTAATAAACAATCGCTACCCCCTGGTATGTGC--CGCTTTCCTAATCAAAATA 4936 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || ||| ||||||||||||||||||||| ||| || |||| ||| | Sbjct 4935 T--------AGGAG-ATCACTCCTTCTCCCGAAGTTACGGGGTCATCTTTCCGAGTTCGT 4885 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTAT 215 | || |||| | | | |||| |||||| Sbjct 4884 TCGACATGGTTCTCTCAAGCGCCCTAGTAT 4855 >seq9020 Length=1238 Score = 87.8 bits (96), Expect = 2e-15 Identities = 149/215 (69%), Gaps = 21/215 (10%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| | |||||| | ||||| ||| || |||| Sbjct 737 CCTTCCGGCACTGGGCAGGCGTCAGCCACCATACATGGTCTTACAA-CTTTGCGGAGACC 795 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| ||||||||||| || || ||| |||| || Sbjct 796 TGTGTTTTTGGTAAACAGTCGGCCGAGCCTGGTCACTGTGACCCCCT------------- 842 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || |||||||||||||| |||||||||||| |||||||||| ||||| Sbjct 843 TTGTG----AGAAG--GCACCCCTTCTCCCAAAGTTACGGGGCTATTTTGCCGAGTTCCT 896 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCT 220 || | |||| | || ||||| ||||||||| Sbjct 897 TAGAGAGAGTT-TCTCGCGCGCCTAGGTATTCTCT 930 >seq8261 Length=46681 Score = 87.8 bits (96), Expect = 2e-15 Identities = 167/243 (69%), Gaps = 13/243 (5%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| |||||| || | ||||| | ||||||||| ||| ||| ||| |||| Sbjct 17029 CCTTCCAGCACCGG-CATGTGTCAGACTCTATACATCGTGTTATAA-CTTAGCAAAGACC 16972 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 | |||||||| |||| | || || ||| || | | || || || |||| | Sbjct 16971 TATGTTTTTAATAAATATTCTCTACCCCCTGGTATGTG--ACGCTTTCCTAATCAAAAGA 16914 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | |||| |||||||| || ||| | || ||||||||||| ||||| Sbjct 16913 T--------AGGAGAG-CACCGCTTCTCCCAAATTTATGAGGTCATTTTGCCGAGTTCCT 16863 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | |||| || ||| |||||| || ||||||||| ||||| | Sbjct 16862 TGGACATGGTTCTCTCAAGCGCCCTARTATACTCTACTTGTTCACCTGTGTTGGTTTTGG 16803 Query 246 GTA 248 ||| Sbjct 16802 GTA 16800 >seq21199 Length=5454 Score = 86.0 bits (94), Expect = 9e-15 Identities = 171/246 (70%), Gaps = 18/246 (7%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACA-TCGACTTACCGTCTTCGCACGGAC 64 ||||||| || ||| || | ||||| | |||||| ||| ||||| ||| ||| | | Sbjct 1212 CCTTCCAGCAACGGACATGTGTCAGACTCTATACAATCGTGTTACCA-CTTAGCAGAGTC 1154 Query 65 CTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCG-ACC-ACCACCAGCTCAAC 122 |||||||||| |||||||||||| ||| || | | || ||| | || |||| Sbjct 1153 TTGTGTTTTTAATAAACAGTCGCTACCCCCT----TGTACGTACCGATTTCCTAATCAAA 1098 Query 123 ACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATT 182 | | || || | ||| ||| |||| |||||||||||| ||||||||||| || Sbjct 1097 ATAT--------AGGAGAG-CACACCT-CTCCTGAAGTTACGGGGTCATTTTGCCGAGTT 1048 Query 183 CCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 | || | || |||| | | |||| |||||| |||||| | || ||||| ||||| Sbjct 1047 CTTTCAACATGGTTCTCTCAGGCGCCCTAGTATACTCTACTTTTTAACTTGTGTTGGTTT 988 Query 243 ACGGTA 248 |||| Sbjct 987 GGGGTA 982 >seq30764 Length=20309 Score = 82.4 bits (90), Expect = 1e-13 Identities = 85/109 (78%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||||||||||||||||| |||||| || |||||| | |||| | Sbjct 16148 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGATGAGTTCCTTTGAGAGAGTTGTCT 16089 Query 201 CGAACGCCTTA-GTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | ||| || ||||||||||||| |||||||||| |||| |||| Sbjct 16088 AG-CGGCCATAGGTATTCTCTACCTACCCACCTGTGTTAGTTTCGGGTA 16041 >seq27942 Length=10591 Score = 77.0 bits (84), Expect = 5e-12 Identities = 67/82 (82%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | |||| || ||| || |||| Sbjct 2122 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTA-CGACTTTGCGGAGACC 2064 Query 66 TGTGTTTTTAGTAAACAGTCGC 87 ||||||||| |||||||||||| Sbjct 2063 TGTGTTTTTGGTAAACAGTCGC 2042 >seq16583 Length=10560 Score = 77.0 bits (84), Expect = 5e-12 Identities = 70/87 (80%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| |||| | ||||||||| ||||| ||| ||| | || Sbjct 9934 CCTTCCAGCACCGGGCAGGTCTCAGACTCTATACATCGTGTTACC-ACTTAGCAGAGTCC 9876 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCC 92 ||| |||||| |||||||||||| ||| Sbjct 9875 TGTATTTTTAATAAACAGTCGCTACCC 9849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694086562162