Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq40995 86.0 7e-15 seq7769 77.0 3e-12 seq9020 75.2 1e-11 seq3702 73.4 4e-11 >seq40995 Length=1634 Score = 86.0 bits (94), Expect = 7e-15 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| | |||| | ||| |||||||||||| || |||| ||| || ||| | Sbjct 834 TAAGGAACTCGRCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCTTCACAAA--G 777 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 776 GCGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 727 >seq7769 Length=43656 Score = 77.0 bits (84), Expect = 3e-12 Identities = 74/95 (78%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||| | |||||||||| ||| || | ||| Sbjct 13569 CAAACCGACACAGGTGAACAAGTAGAGTATACAAGGGCGCTTGAGAGAACCATGTCGAAG 13510 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||| |||||| |||||| |||||||||||| || Sbjct 13509 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAA 13475 >seq9020 Length=1238 Score = 75.2 bits (82), Expect = 1e-11 Identities = 83/110 (75%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| ||||||| |||| || |||| ||| | || ||| || Sbjct 898 TAAGGAACTCGGCAAAATAGCCCCGTAACTTTGGGAGAAGGGGTGCCTTCTCACAAAGGG 839 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | | | ||| || ||| | | | |||||||| |||||||||||| || Sbjct 838 G--GTCACAGTGACCAGGCTCGGCCGACTGTTTACCAAAAACACAGGTCT 791 >seq3702 Length=28645 Score = 73.4 bits (80), Expect = 4e-11 Identities = 60/73 (82%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 51 TATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCCTGTAACTT 110 ||||||| | |||||||| ||| || | |||||||| |||||| |||||| ||||||| Sbjct 9966 TATACTAGGACGCTTGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCCCGTAACTT 9907 Query 111 CGGGATAAAGGGT 123 ||||| || |||| Sbjct 9906 CGGGAGAAGGGGT 9894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530960227276