Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22]
46,594 sequences; 665,186,956 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq910 91.5 1e-16
seq20002 86.0 6e-15
seq3702 86.0 6e-15
seq24435 78.8 9e-13
seq27942 77.0 3e-12
seq33171 75.2 1e-11
seq16583 75.2 1e-11
>seq910
Length=18343
Score = 91.5 bits (100), Expect = 1e-16
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | ||||||||||||||||||||||| ||||||| || | || ||
Sbjct 5484 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 5543
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || |||| |||||||||||| |||||||
Sbjct 5544 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 5578
>seq20002
Length=41097
Score = 86.0 bits (94), Expect = 6e-15
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | |||| |||||||||||||||||| ||||||| || | || ||
Sbjct 4959 ATACCAGGGGGTAGCGATTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 5018
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || |||| |||||||||||| |||||||
Sbjct 5019 GTATAGAGTCTGACACCTGCCCGGTGCAGGAAGGT 5053
>seq3702
Length=28645
Score = 86.0 bits (94), Expect = 6e-15
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| ||||||||||||||||||||||| ||||||| || | || ||
Sbjct 9861 ATACCAGGGGRTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 9802
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || |||| ||| |||||||| |||||||
Sbjct 9801 GTATAGAGTCTGACACCTRCCCGGTGCTGGAAGGT 9767
>seq24435
Length=18177
Score = 78.8 bits (86), Expect = 9e-13
Identities = 74/95 (78%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
||||||| | ||||||||||||||||||||| | ||||||| || | || ||
Sbjct 4794 ATACCAGAGAGTAGCGACTGTTTATTAAAAACACGGGACTCTGCTAAGTGGTAACATGAT 4735
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || |||| |||| ||||||| |||||||
Sbjct 4734 GTATAGAGTCTGACACCTGSCCGGTGCTGGAAGGT 4700
>seq27942
Length=10591
Score = 77.0 bits (84), Expect = 3e-12
Identities = 68/85 (80%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127
||||||||||| |||||||||| ||| ||||| || ||| | |||| ||| |||
Sbjct 2042 GCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGA 2101
Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152
||||||||| |||||||||||| ||
Sbjct 2102 CGCCTGCCCAGTGCCGGAAGGTCAA 2126
>seq33171
Length=8894
Score = 75.2 bits (82), Expect = 1e-11
Identities = 80/106 (75%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || ||||||| ||||||||||| |||||||||| ||||||||| |
Sbjct 3002 GGTCGCAGTGACCAGGCTCGGGCGACTGTTTACCAAAAACACAGGTCTCTGCAAAGTTGT 2943
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | ||||| || ||||||| |||| ||||||||||| ||
Sbjct 2942 AAGACCATGTATATGGGCTGACGCCAGCCCAATGCCGGAAGGTCAA 2897
>seq16583
Length=10560
Score = 75.2 bits (82), Expect = 1e-11
Identities = 65/81 (80%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127
|||||||||||||||||| |||| ||||||| || | || || |||||| || |||
Sbjct 9854 GCGACTGTTTATTAAAAATACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGA 9913
Query 128 CGCCTGCCCGGTGCCGGAAGG 148
|||||||||||| ||||||
Sbjct 9914 GACCTGCCCGGTGCTGGAAGG 9934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476584782314
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |