Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq910 91.5 1e-16 seq20002 86.0 6e-15 seq3702 86.0 6e-15 seq24435 78.8 9e-13 seq27942 77.0 3e-12 seq33171 75.2 1e-11 seq16583 75.2 1e-11 >seq910 Length=18343 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 5484 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 5543 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 5544 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 5578 >seq20002 Length=41097 Score = 86.0 bits (94), Expect = 6e-15 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | |||| |||||||||||||||||| ||||||| || | || || Sbjct 4959 ATACCAGGGGGTAGCGATTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 5018 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 5019 GTATAGAGTCTGACACCTGCCCGGTGCAGGAAGGT 5053 >seq3702 Length=28645 Score = 86.0 bits (94), Expect = 6e-15 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| ||||||||||||||||||||||| ||||||| || | || || Sbjct 9861 ATACCAGGGGRTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 9802 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| ||| |||||||| ||||||| Sbjct 9801 GTATAGAGTCTGACACCTRCCCGGTGCTGGAAGGT 9767 >seq24435 Length=18177 Score = 78.8 bits (86), Expect = 9e-13 Identities = 74/95 (78%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 ||||||| | ||||||||||||||||||||| | ||||||| || | || || Sbjct 4794 ATACCAGAGAGTAGCGACTGTTTATTAAAAACACGGGACTCTGCTAAGTGGTAACATGAT 4735 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||| ||||||| ||||||| Sbjct 4734 GTATAGAGTCTGACACCTGSCCGGTGCTGGAAGGT 4700 >seq27942 Length=10591 Score = 77.0 bits (84), Expect = 3e-12 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| |||||||||| ||| ||||| || ||| | |||| ||| ||| Sbjct 2042 GCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGA 2101 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||| |||||||||||| || Sbjct 2102 CGCCTGCCCAGTGCCGGAAGGTCAA 2126 >seq33171 Length=8894 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/106 (75%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || ||||||| ||||||||||| |||||||||| ||||||||| | Sbjct 3002 GGTCGCAGTGACCAGGCTCGGGCGACTGTTTACCAAAAACACAGGTCTCTGCAAAGTTGT 2943 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | ||||| || ||||||| |||| ||||||||||| || Sbjct 2942 AAGACCATGTATATGGGCTGACGCCAGCCCAATGCCGGAAGGTCAA 2897 >seq16583 Length=10560 Score = 75.2 bits (82), Expect = 1e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 |||||||||||||||||| |||| ||||||| || | || || |||||| || ||| Sbjct 9854 GCGACTGTTTATTAAAAATACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGA 9913 Query 128 CGCCTGCCCGGTGCCGGAAGG 148 |||||||||||| |||||| Sbjct 9914 GACCTGCCCGGTGCTGGAAGG 9934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476584782314