Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq33171 159 7e-37 seq40995 158 2e-36 seq9020 134 3e-29 seq5613 118 2e-24 seq25465 93.3 8e-17 seq7172 93.3 8e-17 >seq33171 Length=8894 Score = 159 bits (176), Expect = 7e-37 Identities = 174/230 (76%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| || || | || ||||||| ||||| ||||| Sbjct 2509 GGGACAGTCTCAGGTAGACAGTTTCTATGAGGTGTAGGCTTCCCAAAAGGTAACAGAGGC 2450 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | ||| ||| | || | | |||||||||||| ||||| Sbjct 2449 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 2391 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | |||| | ||| ||||||||||||| | || |||| ||||||| ||| Sbjct 2390 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAARTMGGCCTTAGTGATCCGACGG 2331 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 2330 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 2281 >seq40995 Length=1634 Score = 158 bits (174), Expect = 2e-36 Identities = 176/231 (76%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| |||||||||| ||||||||||| Sbjct 393 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 334 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | |||| | |||| | ||| ||| | || | | |||||||||||| ||||| Sbjct 333 GTATAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 275 Query 230 GTTTGACTGCGACACCCTCA-AGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288 | |||||||| | |||| | | || ||| || || |||||||| |||| ||||||| || Sbjct 274 GCTTGACTGCAAGACCCACCCATTCGAGCTGGAACAAAAGTCGGCCTTAGTGATCCGACG 215 Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||| || ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 214 GTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 164 >seq9020 Length=1238 Score = 134 bits (148), Expect = 3e-29 Identities = 167/229 (73%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||| ||| |||| | |||||| |||||| |||||||||| ||||||||||| Sbjct 358 GGGATAGTCTCAGGTAGACAGTTTCTATGGGGCRTAGGCCTCCCAAARGGTAACGGAGGC 299 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 | ||||| | |||| | ||| ||| | | |||||||||| | ||||| | Sbjct 298 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTGGACCTCGAGTGCAAAGGAAGAAGGGAG 239 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 ||||||||| | |||| | ||| ||||||||||||| ||| |||| ||| ||| |||| Sbjct 238 TTTGACTGCAAGACCCACTCGTCGAGCAGGGACGAAAAACGGCCTTAGTGA-CCGACGGT 180 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || | ||||| || | ||| || || |||||||| ||| || |||||| Sbjct 179 GCCAAGTGGAAGGGTCATCGATCAACAGATAAAAGTTACTCTAGGGATA 131 >seq5613 Length=5768 Score = 118 bits (130), Expect = 2e-24 Identities = 168/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||| ||| |||| | ||||| ||||||| |||||||||| |||| |||||| Sbjct 1793 GGGATAGTCTCAGGTAGATAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAATGGAGGC 1852 Query 171 GCCCAAAGATACCCTC-AGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGG 228 | ||||| | |||| ||| ||||||| | || | | |||||||||||||||||| Sbjct 1853 GTGCAAAGGTTTCCTCGAGCC-GGATGGAGATTG-GCCCTCGAGTGCAAAGGCAAAAGGG 1910 Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288 | |||||| | | | || | || |||||||| ||||||||| | || |||||| | Sbjct 1911 AGCTTGACTTCAAGATCCACCCATCGAGCAGGGATGAAAGTCGGCCCTAGTGATCCAATG 1970 Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || | || ||||| | || || ||| || ||||||| ||| || |||||| Sbjct 1971 GTACCGAGTGGAAGGTCCATCTCTCAACAGATAAAATTTACTCTAGGGATA 2021 >seq25465 Length=22911 Score = 93.3 bits (102), Expect = 8e-17 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 216 AAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCT 275 ||||| | ||||| | |||||| | | | || | ||| |||||||||||||||||| || Sbjct 5140 AAAGGTAGAAGGGAGCTTGACTACAAGATCCACCCGTCGAGCAGGGACGAAAGTCGGCCT 5199 Query 276 TAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGG 335 || |||||| |||||| || || || | |||||||| | |||||||| ||| || || Sbjct 5200 TAGTGATCCAACGGTGCCGAGTGAAAGAGTCGTCGCTCAATAGATAAAAGTTACTCTAGG 5259 Query 336 GATA 339 | || Sbjct 5260 GGTA 5263 >seq7172 Length=105988 Score = 93.3 bits (102), Expect = 8e-17 Identities = 161/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| ||| | || ||| | | |||| ||||| |||| ||||||||||| Sbjct 71846 GGGACAGTCCCAGGTAGACATTTTCAATTGGGCATAGGCCTCTCAAAAGGTAACGGAGGC 71905 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | | ||| ||| | | | | | ||||||||| || || | Sbjct 71906 GTGCAAAGGTTTCCTCGGGTAGGACGGAGA-TTTCCACTCTAGTGCAAAGACAGAA-TGA 71963 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||| | | |||| | || |||| |||| ||| |||| |||| |||| | ||| Sbjct 71964 GCTTGACTACAAGACCCACCCATCGAGCATGGACAAAATTCGGCCTTAGTGATTTGACGG 72023 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| | ||||| | ||||||| || || ||||| ||| || |||||| Sbjct 72024 TGCCGTGTGGAAGGTATGTCGCTCAACAGAAAAAAGTTACACTAGGGATA 72073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981942260544