Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq9020 96.9 4e-18 seq26452 89.7 6e-16 seq33171 87.8 2e-15 seq21199 82.4 8e-14 seq6430 80.6 3e-13 seq30827 77.0 4e-12 seq8261 73.4 4e-11 >seq9020 Length=1238 Score = 96.9 bits (106), Expect = 4e-18 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||| |||| || |||| || |||||||||| |||| | ||||||| || Sbjct 518 GGGTCTTCCTGTCCAGGGGCAGGTAGTCCGCATCTTCACAGATATGTCTATTTCACCAAG 577 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | || |||| ||| || ||||||| ||| |||||||||||| Sbjct 578 C-CTCTCTCCGATACAGTGCGCAGATCGTTACGCCTTTCGTGCGGGTYGGAACTTACCCG 636 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 637 ACAAGGAATTTCGCTACCTTAGGACCGTTA 666 >seq26452 Length=30065 Score = 89.7 bits (98), Expect = 6e-16 Identities = 52/54 (96%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 120 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 5037 TTCGTGCGGGGCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 4984 >seq33171 Length=8894 Score = 87.8 bits (96), Expect = 2e-15 Identities = 108/150 (72%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | |||| || ||| Sbjct 2682 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTGACCGAG 2741 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | |||| || ||| || ||||||| ||||| |||||||||| Sbjct 2742 C-CTCTCTCCGAGATAGTGTCCAGATCGTTACGCCTTTCGTGCGGGTCGRAACTTACCCG 2800 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||| | |||||||||||||||| Sbjct 2801 ACAAGGAATTTTGATACCTTAGGACCGTTA 2830 >seq21199 Length=5454 Score = 82.4 bits (90), Expect = 8e-14 Identities = 105/149 (70%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||| |||| || |||| || |||||||||| || | | ||||||||| | | Sbjct 1421 GGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGG 1362 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 || | |||| | |||||||||||||||||||| | ||| ||| Sbjct 1361 TCCATGTCGGAGAAAACGGGGCAGTCGGTACACCATTCGTGCAGGTCGCTAATTATGCGA 1302 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||| |||||||||||| |||| Sbjct 1301 CAAGGAATTTTGCTACCTTAGGATAGTTA 1273 >seq6430 Length=40977 Score = 80.6 bits (88), Expect = 3e-13 Identities = 103/146 (71%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| || |||||||||| | | | |||||||| | Sbjct 10502 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGCGAATTAAATTTCACCG 10443 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | ||||||| |||||||||| ||||||||| | ||| | Sbjct 10442 AATCCATGTCGGAGACAGCAGGGCAGTGATTACACCATTCATGCAGGTCGCTATTTATGC 10383 Query 143 GACAAGGAATTTCGCTACCTTAGGAC 168 |||||| ||||||||||||||||||| Sbjct 10382 GACAAGAAATTTCGCTACCTTAGGAC 10357 >seq30827 Length=21152 Score = 77.0 bits (84), Expect = 4e-12 Identities = 81/111 (73%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 48 TAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNNNN 107 || || |||||||||| || | | ||||||||| | | || | ||||||| Sbjct 16986 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 16927 Query 108 NNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT 158 |||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 16926 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCT 16876 >seq8261 Length=46681 Score = 73.4 bits (80), Expect = 4e-11 Identities = 102/146 (70%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| | |||| || |||| |||| || | | ||||||||| | Sbjct 17239 CGGGGTCTTACCGTCTAGCTGTTGGTACTCCGCATTTTCATGGAGAATTCAATTTCACCG 17180 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | | ||||||| ||||| ||| ||||||||| ||||| | Sbjct 17179 GGTCCATGTTGGAGACAGCTGGGCAGTCAATACAC-ATTTGTGCAGGTCTCTACTTATGC 17121 Query 143 GACAAGGAATTTCGCTACCTTAGGAC 168 |||||||||||||||||| ||||||| Sbjct 17120 GACAAGGAATTTCGCTACTTTAGGAC 17095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546953005206