Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= AAMG01001210.1 Length=647 Score E Sequences producing significant alignments: (Bits) Value seq10252 379 8e-103 >seq10252 Length=33684 Score = 379 bits (420), Expect = 8e-103 Identities = 313/380 (82%), Gaps = 15/380 (4%) Strand=Plus/Plus Query 276 GCTCCAAAGAGGAAAAGGCCAAGGCAAGTAATGGAAAATCATGGAGGATTTGGTATAAGG 335 ||||||||||||||||| ||||||||||| ||||||||| |||||||||| || |||| Sbjct 4493 GCTCCAAAGAGGAAAAGACCAAGGCAAGTCTTGGAAAATCCTGGAGGATTTAGTGTAAGA 4552 Query 336 AGCAGCCCCATTTCG---------GCTAAAGTGGAGATGGATCAAACAACAATGAAGATG 386 |||||||||||||| |||||||| ||||||||||| || ||||||||| | Sbjct 4553 AGCAGCCCCATTTCATCTTCTACAGCTAAAGTTGAGATGGATCAGACGACAATGAAGTTA 4612 Query 387 GAGGTTTCTTCTCCTAATTTGGAGAAGACCCCACAATCTACAGCGGAAAATGGAGTTTCC 446 ||||||| ||| |||||||||||||||| |||||| ||| | || ||||||| ||||| Sbjct 4613 GAGGTTTTTTCACCTAATTTGGAGAAGAACCCACAGTCTGCTGCTGAAAATGTTGTTTCT 4672 Query 447 TTATATGATTTGGGTGCTTCTGTACAAAGTTTGCCGGTGGTAACAGATCCGGTACCGGAG 506 ||||||||||| ||| ||||| ||||||||||||| || | |||||||||||||||| Sbjct 4673 TTATATGATTTAAGTGGTTCTGCTCAAAGTTTGCCGGCGGCAGTAGATCCGGTACCGGAG 4732 Query 507 CCGATGAAGGTTGAATCTGAGGTCAAGAGGAGGCCTGATGAATCTGAATTTACTATGGAG 566 ||||||||| | |||||||| ||||||||||||||||||||| ||||||| ||||||| Sbjct 4733 CCGATGAAGATGGAATCTGACGTCAAGAGGAGGCCTGATGAAACTGAATT---TATGGAG 4789 Query 567 AGTAAAGTGGAAGTGAATTCACCTAAGAAGGATACTTCTACTGTTGTTGCAGCGGAGAGT 626 ||||| | |||||||||||| || |||| ||| ||| |||| ||| | || || | | Sbjct 4790 AGTAAGGAGGAAGTGAATTCCCCAAAGAGGGAATCTTTTACT-TTG--GGAGTAGATAAT 4846 Query 627 AGTATTCATGAGGTTGCTGC 646 ||||||| ||||| || ||| Sbjct 4847 AGTATTCGTGAGGATGTTGC 4866 Score = 255 bits (282), Expect = 2e-65 Identities = 205/245 (84%), Gaps = 17/245 (7%) Strand=Plus/Plus Query 39 AAGCCACACGGACAAAAAAGGCCACCAGCAAAGTCACCACCTAAAGCTTCTTCATCTAAT 98 ||||| | |||||||| |||| || ||||||||||| || ||||||||||||||||| Sbjct 4160 AAGCCTAATGGACAAAAGCGGCCGCCGGCAAAGTCACCTCCAAAAGCTTCTTCATCTAAC 4219 Query 99 CCTGAAGAGCTGGAGATTGAGATTGCTGAAGTTCTTTTTGGTTTG-------AGTCATCA 151 ||||||||||| ||||||||||||||||||||||| | ||| ||| ||||| || Sbjct 4220 CCTGAAGAGCTTGAGATTGAGATTGCTGAAGTTCTGTATGGATTGATGACTCAGTCA-CA 4278 Query 152 TGGACCTTCCAAAAAAGATACAAGTGTGACAAATGATAATACAAGAGAAGTTAATAATAA 211 |||||||| |||||||| |||||| |||||| ||||||||||||| |||||| Sbjct 4279 AGGACCTTCAAAAAAAGA---AAGTGTACCAAATG---ATACAAGAGAAGT---TAATAA 4329 Query 212 CAGATCCAGAGTTTCATCTCCTGTTTCTAATTCTAACTCATCAGCTACTCCTTTATCTGC 271 ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| Sbjct 4330 CAGATCCAGAGTTTCATCTCCTGCTTCTAATTCAAACTCATCAGCAACTCCTTTATCTGT 4389 Query 272 TGCTG 276 || || Sbjct 4390 TGTTG 4394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1963855912372