Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq33171 192 1e-46 seq43907 152 1e-34 seq6663 111 4e-22 seq28613 107 5e-21 seq40125 105 2e-20 seq9891 104 6e-20 seq38645 98.7 2e-18 seq12216 98.7 2e-18 seq30764 96.9 9e-18 seq3814 96.9 9e-18 seq9291 93.3 1e-16 seq17593 80.6 7e-13 >seq33171 Length=8894 Score = 192 bits (212), Expect = 1e-46 Identities = 300/414 (72%), Gaps = 15/414 (4%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||| | |||||| ||||| | Sbjct 3949 CCACAACTCAT-CCGCTDA-TTCTTCAACATCAGTCGGTTCAGACCTCCACTTAGTT-TC 4005 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || ||| ||| ||||||||| ||| | ||| ||||| || | || Sbjct 4006 ACCCAAGCTT-CATCCTTGTCAT-GGATAGATCACCCAGGTTT-GGGTCCATAAGC-AGT 4061 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 || | |||||| |||||||||||| ||||||| |||| | ||| |||| | Sbjct 4062 TACAATT-GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCAGTGGGTTCCCTTAACCAA 4119 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 | ||||| || |||||| ||| |||| | ||| ||| | | |||| | | | Sbjct 4120 -GACACTGCCTATGAGTCGCCGACTCATTCTTCAACAGGAATGGGGTCAG--AGCCCTGG 4176 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 | ||||||||||||| || |||||||||| | ||||||| ||||||| | ||||| Sbjct 4177 GTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTAACTCCCCGATG-GGGGT 4235 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 |||||| || |||||||||||||||| ||| |||||||||| ||| | |||||||||| Sbjct 4236 GCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGASTATTTAGCCT 4295 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| || ||||| || || | ||| | || | ||||||| Sbjct 4296 TGCAAGGTGGTCCTTGCAGATTCACACGGGATTCCACGTTCCCCATGCTACTCG 4349 >seq43907 Length=1880 Score = 152 bits (168), Expect = 1e-34 Identities = 268/373 (72%), Gaps = 16/373 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| || | | Sbjct 873 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTTTTT-TC 817 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| || || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 816 ACCCAAGATT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 761 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | |||||| |||||| | |||| |||||| || | | ||| |||| | Sbjct 760 GACAATT-GCCCTATGAAGACTTGATTTT-GCTACGGCTACAGTGGGTTCCCTTAACCAA 703 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||||| | |||| | ||| ||| |||| |||| | | | Sbjct 702 -GCCACTGCTTATGAGTCGCTGGCTCATTCTTCAATAGGCACGCGGTCAG--AGCCCTGG 646 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 || |||||||||| || |||||| ||| | ||||||||||||||| | ||||| Sbjct 645 CTCCTTCCACTGCTTGGGAGCTTACGGTHTCATGTTCTATTTCACTCCCCGAT-GGGGGT 587 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 | |||| || |||||||||| ||||| | | |||||||||| ||| | ||||||||| Sbjct 586 TTATTTCACCCTTCCCTCACGATACTACTCCGCTATCGGTCACCCAGGAATATTTAGCC- 528 Query 367 TGGAGGATGGTCC 379 || | | |||||| Sbjct 527 TGCAAGTTGGTCC 515 >seq6663 Length=42086 Score = 111 bits (122), Expect = 4e-22 Identities = 244/353 (69%), Gaps = 27/353 (8%) Strand=Plus/Minus Query 29 TTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCC 88 || |||||| || |||||| ||| |||| | ||||| |||||||| |||| | || | Sbjct 2121 TTCTTCAACAGTCGTCGGT-CGGACCTCTACTTAGT--TTACCCAAGCTTT-ATCCCGGT 2066 Query 89 CATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGA 148 ||| |||||||| ||| | || |||| | || || || | ||||| || | Sbjct 2065 CAT-GGATAGATTACCCAGGTT-CGGGACCATAAGT-AGTGAAAATTT-CCCTATGAATA 2010 Query 149 CTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGC 206 ||||||||| ||||| |||| || ||| |||| | ||||||| || |||||| Sbjct 2009 CTCGCTTTTA-CTACGGCTCCGGTAGGTTCCCTTAACCAA-GCCACTGCCTATGAGTCGC 1952 Query 207 TGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACG 266 | | |||| | ||| ||| |||| |||| | | | ||||||||||||| | Sbjct 1951 CGGCTCATTCTTCAACAGGCACGCGGTCAG--AGCCCTGGCTCCTCCCACTGCTTGGGAG 1894 Query 267 CATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 326 | |||| ||| | | ||||||| | |||| | |||||||| |||||| Sbjct 1893 CTTACGCTTTTATGTTCTATTTAAATCCC------GAGGTTCTTTAG-------CCTCAC 1847 Query 327 GGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCC 379 ||||||| ||| |||| ||||| || |||||||||||||| || ||||||| Sbjct 1846 GGTACTACTTCTCTATTGGTCACCAAGGAGTATTTAGCCTTGCAGAATGGTCC 1794 >seq28613 Length=12160 Score = 107 bits (118), Expect = 5e-21 Identities = 90/108 (83%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 272 GGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTAC 331 ||||||| | ||||||||||||||| | |||||||||||| || |||| ||||||||| Sbjct 9199 GGTTTCATGTTCTATTTCACTCCCCGATG-GGGGTTCTTTTCACCCTTCC-TCACGGTAC 9256 Query 332 TAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCC 379 || ||| |||||||||| ||| |||||||| ||||| | | |||||| Sbjct 9257 TACTTCGCTATCGGTCACCCAGGAGTATTTAACCTTGCAAGGTGGTCC 9304 >seq40125 Length=6040 Score = 105 bits (116), Expect = 2e-20 Identities = 89/108 (82%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 272 GGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTAC 331 ||||||| | ||||||||||||| | | |||||||||||| || |||||||||| ||| Sbjct 5016 GGTTTCATGTTCTATTTCACTCCTCGATG-GGGGTTCTTTTCACCCTTCCCTCACGATAC 5074 Query 332 TAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCC 379 || ||| |||||||||| ||| ||||||||||| || | | |||||| Sbjct 5075 TACTTCGCTATCGGTCACCCAGGAGTATTTAGCCCTGCAAGGTGGTCC 5122 >seq9891 Length=18353 Score = 104 bits (114), Expect = 6e-20 Identities = 80/94 (85%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 ||||||||||||| || |||||||||| | ||||||||||||||| | |||||||| Sbjct 93 CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GGGGTTCT 35 Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATC 343 |||| || |||||||||||||||| ||| ||||| Sbjct 34 TTTCACCCTTCCCTCACGGTACTACTTCGCTATC 1 >seq38645 Length=7819 Score = 98.7 bits (108), Expect = 2e-18 Identities = 88/109 (81%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 |||||||| | |||||| |||||||| | ||||||| |||| || ||||||||||||| Sbjct 5974 CGGTTTCATGTTCTATTCCACTCCCCGGTG-GGGGTTCCTTTCACCCTTCCCTCACGGTA 6032 Query 331 CTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCC 379 ||| || |||||||||| || |||||| ||||||| | | |||||| Sbjct 6033 CTACTTTGCTATCGGTCACCCAAGAGTATTAAGCCTTGCAAGGTGGTCC 6081 >seq12216 Length=53235 Score = 98.7 bits (108), Expect = 2e-18 Identities = 258/381 (68%), Gaps = 25/381 (7%) Strand=Plus/Minus Query 41 AGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGAT 100 |||||||| || |||||| ||||| | | |||| ||| || |||| ||| ||||||| Sbjct 1545 AGTCGGTT-GGACCTCCACTTAGTT-TCAYCCAAGCTT-CATCCTGGTCAT-GGATAGAC 1490 Query 101 CGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGC 160 ||| | ||| |||||||| || ||| | |||||| |||||||| || ||| Sbjct 1489 AACCCAGGTTT-GGGTCTATAAGA-AGTGAC-ACTTGCCCTATGAAGACTCG-TTGTCGT 1434 Query 161 TACGCCTCCCCTAT-TCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATAC 219 || | ||| | || |||| | ||||||| || |||||| | | |||| | | Sbjct 1433 TATGGCTCTGGTGGGTCCCTTAACCAA-GCCACTGCCTATGAGTCGCCGGCTCATTCTTC 1375 Query 220 AAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAG 279 |||||| |||| || | | | | |||||| |||||| || ||| ||| | Sbjct 1374 AAAAGGCACGCGGTTAG--AGCCCTGGCTCCTCCCATTGCTTGGGAGCTTACACTTTTAT 1317 Query 280 GATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCAC 339 | ||| | |||||||| ||||||||| ||||||| |||||| ||||| Sbjct 1316 GTTCTGTGTCACTCCCG-----GGGGTTCTTA--------CCCTCACAGTACTACTTCAC 1270 Query 340 TATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTT 399 |||| |||| ||| |||||||||||||| | | |||||| | ||||| || || Sbjct 1269 TATCTGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATT 1210 Query 400 TCTCGTGCTCCGTCCTACTCG 420 | |||| || | ||||||| Sbjct 1209 CCATGTGCCCCATGCTACTCG 1189 >seq30764 Length=20309 Score = 96.9 bits (106), Expect = 9e-18 Identities = 255/373 (68%), Gaps = 16/373 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| | | ||||| | |||| |||| | Sbjct 15187 CCACAACTCAT-CCGCTGA-TTCTTCAACATCACTTGGTTCAAACATCCACATAGTT-TC 15131 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 15130 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 15075 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | |||||| |||||||| ||| |||| | |||| | ||| | | | Sbjct 15074 GACAATT-GCCCTATGAAGACTCGACTTT-GCTATGGCTCCGGTGGGTTCCCTAACGAAA 15017 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 |||| || |||||| | | |||| | ||| ||| ||| |||| | | | Sbjct 15016 --CCACAATCTATTAGTCGCCGGCTCATTTTTCAATAGGCACGTGGTCAG--AGCCCTGG 14961 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || |||||||||| | |||||||||||||| | ||||| Sbjct 14960 ATCCTCCCACTGCTTGGCAGCTTACGGTTTCATGTTCTATTTCACTCCCAGAT-AGGGGT 14902 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 | |||| || || |||||| |||||| || || | ||||| || |||||||| ||| Sbjct 14901 TATTTTAACCCTTGCCTCACAGTACTACATCCCTGTTGGTCACCCATGAGTATTTACCCT 14842 Query 367 TGGAGGATGGTCC 379 | | | |||||| Sbjct 14841 TACAAGGTGGTCC 14829 >seq3814 Length=44336 Score = 96.9 bits (106), Expect = 9e-18 Identities = 77/92 (84%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 ||||||||||||| || |||||||||| | ||||||||||||| | | |||||||| Sbjct 5362 CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCMCGATG-GGGGTTCT 5304 Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTA 341 |||| || |||||||||||||||| ||| ||| Sbjct 5303 TTTCACCCTTCCCTCACGGTACTACTTCGCTA 5272 >seq9291 Length=21696 Score = 93.3 bits (102), Expect = 1e-16 Identities = 82/101 (81%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 282 TCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTA 341 |||||| ||||||| | ||||||||||| |||||||||||||||||| || | ||| Sbjct 21096 TCTATTGCACTCCC-TAAATAGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGCTA 21154 Query 342 TCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCC 382 ||||||| | || | || |||| ||| |||| ||||||||| Sbjct 21155 TCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCCCC 21195 >seq17593 Length=50497 Score = 80.6 bits (88), Expect = 7e-13 Identities = 116/160 (73%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 208 GACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGC 267 ||| |||| ||||| ||| ||||| ||| | | || |||||||| ||| | Sbjct 46954 GACTCATTTTACAACAGGGACGCAATCAG--AGCCCTGTCTTCTCCCACTACTTTGGAGA 47011 Query 268 ATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACG 327 ||| |||||| | || |||||||||| | | |||||||||||| || || ||||| | Sbjct 47012 TTACAGTTTCATGCTCCATTTCACTCCACGATG-GGGGTTCTTTTCACCCTTACCTCATG 47070 Query 328 GTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT 367 |||||| |||| |||| ||| | ||||||||||||| Sbjct 47071 GTACTACTTCAATATCAGTC-TCCTAAAGTATTTAGCCTT 47109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241021488896