Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq17583 356 4e-96 >seq17583 Length=8179 Score = 356 bits (394), Expect = 4e-96 Identities = 244/275 (89%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 1 CGAGTCAATGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGG 60 |||| || ||||| ||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 5905 CGAGCCAGTGTCCCAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTAACTTGTTGGG 5846 Query 61 GAGAGTCCGACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCT 120 ||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 5845 CAGAATCCGACCCGAATGTTAAAGTCGGAGCATGTGGTGTGGATCTTGGTGATCGGACCT 5786 Query 121 TGGTTACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACA 180 ||||||||||||||| |||||||| ||||| ||||||||||| || ||| | ||||||| Sbjct 5785 TGGTTACCGGGTCGGCCTATCAAGGTGCCCCGCATGGGTTCTTTTTCGTAGAAAACAACA 5726 Query 181 AAAAGGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGAT 240 |||| | || ||||| |||||||| |||||||| ||||||||||||||||||| |||| Sbjct 5725 AAAAACAAGGACAAAACAGTAAATTAACAAAGATAAATGTTCCTGATGAATTTTCAGGAT 5666 Query 241 TTGTGCAATCTGGATGCTGTGTGGAGATCTGAAAT 275 |||| ||||| ||||| || ||||||||||||||| Sbjct 5665 TTGTACAATCCGGATGTTGCGTGGAGATCTGAAAT 5631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917972080704