Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq35056 120 3e-25 seq6570 111 1e-22 seq379 111 1e-22 seq8902 98.7 8e-19 seq831 98.7 8e-19 seq12130 93.3 4e-17 seq33171 91.5 1e-16 seq20067 86.0 5e-15 seq30764 84.2 2e-14 seq1053 84.2 2e-14 seq777 82.4 6e-14 seq11253 78.8 8e-13 >seq35056 Length=7923 Score = 120 bits (132), Expect = 3e-25 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | ||| |||| ||| ||| ||||||||| Sbjct 2160 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTADCTCACCCTCGCGG 2219 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| | |||||| ||||||| |||| |||||||| ||| Sbjct 2220 GATCGCGACCCTTTGTCCCGRCYATTGTAGCACGTGTGTTGCCCAGGGCATAAGGGGCAT 2279 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||| ||||| || |||| Sbjct 2280 GATGACTTGACGTCATCCTCACCTTCSTCCGGCTTATCAC 2319 >seq6570 Length=19027 Score = 111 bits (122), Expect = 1e-22 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | ||| ||| ||||||| ||||||||| Sbjct 13635 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTKGGGGTTAGCTCACCCTCGCGG 13694 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | || ||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 13695 GATCACGACCCATTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 13754 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTC 159 || ||||||||||||||| ||||||||||||| || || Sbjct 13755 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATC 13792 >seq379 Length=12116 Score = 111 bits (122), Expect = 1e-22 Identities = 117/153 (76%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | | Sbjct 927 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 985 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| |||| | ||| |||| ||||||| |||| ||||||||||| || Sbjct 986 CCTTGCTTCCCATTGTAATTTCCAATGTAGCACGTGTGCGGCCCAGCCCATAAGGGCAAT 1045 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGT 154 ||||||||||||||||||||||||||||| || Sbjct 1046 AAGGACTTGACGTCATCCCCACCTTCCTCCAGT 1078 >seq8902 Length=4548 Score = 98.7 bits (108), Expect = 8e-19 Identities = 74/87 (85%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 75 TGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGT 134 |||| | |||||||| ||||||| |||| ||||||||||||||| ||||||||||| Sbjct 3111 TGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGT 3052 Query 135 CATCCCCACCTTCCTCCGGTTTGTCAC 161 ||||||||||||||||| || | |||| Sbjct 3051 CATCCCCACCTTCCTCCAGTATATCAC 3025 >seq831 Length=31556 Score = 98.7 bits (108), Expect = 8e-19 Identities = 121/162 (75%), Gaps = 5/162 (3%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACA--CTTTCTGGGATTAGCTCCCCCTCGC 59 |||||| |||| ||||||| | | || || ||||| || ||| ||||| ||| | Sbjct 2413 CGAGTTACAGAGAACAATCCTAATT--GAAGCAATCTTTCAGG-ATTTGCTCCACCTTAC 2469 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 | || ||| |||| | |||||||| ||||||| |||| |||||||||||| Sbjct 2470 AACCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCC 2529 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||||||||||||| |||||| || | |||| Sbjct 2530 ATGCGGACTTGACGTCATCCCCACCGTCCTCCAGTATATCAC 2571 >seq12130 Length=79717 Score = 93.3 bits (102), Expect = 4e-17 Identities = 120/161 (75%), Gaps = 5/161 (3%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGAT-ACAC-TTTCTGGGATTAGCTCCCCCTCGC 59 ||||||||| || |||||| | | ||| ||| ||| |||| ||||||| || | || Sbjct 1359 CGAGTTGCAACCTGCAATCCAAATT--GATGACAGGTTTTTGGGGTTAGCTCACCTT-GC 1303 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 ||| | || |||| ||| | | ||||||| |||||||| ||| | |||||||| | Sbjct 1302 GGGATCTCGACCCTTTGTCTCAAAAATTGTATCACGTGTGACGCCAAAGGCATAAGGGGC 1243 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCA 160 || |||| ||||||||| ||||||||||||| || ||| Sbjct 1242 ATAGTTACTTCACGTCATCCTCACCTTCCTCCGGCTTATCA 1202 >seq33171 Length=8894 Score = 91.5 bits (100), Expect = 1e-16 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || |||||| ||| | ||| |||| ||| ||| ||||||||| Sbjct 6651 CGAGTTGCAGCCTGCAATCCAAACTGAGGACGGGTTTTTGGGGTTATCTCACCCTCGCGG 6710 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| || | ||| |||||||| ||||||| |||| ||||| | ||| Sbjct 6711 GATCGCGACCTTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGTCATAACAGGCAT 6770 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || | |||||||||||| ||||||||| ||| || |||| Sbjct 6771 GATTAGTTGACGTCATCCTCACCTTCCTTCGGCTTATCAC 6810 >seq20067 Length=17068 Score = 86.0 bits (94), Expect = 5e-15 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 75 TGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGT 134 |||| | |||||||| ||||||| |||| ||||||||||| |||| ||||||||||| Sbjct 7772 TGTAATTGCCATTGTAGCACGTGTGTGGCCCAACCCATAAGGGGCATGCGGACTTGACGT 7831 Query 135 CATCCCCACCTTCCTCC 151 |||||||| |||| ||| Sbjct 7832 CATCCCCATCTTCTTCC 7848 >seq30764 Length=20309 Score = 84.2 bits (92), Expect = 2e-14 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 36 TTTCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACG 95 ||| |||| || | | |||| ||||| | | | | || ||| |||||||| || Sbjct 12185 TTTTTGGGGTTTGATAACCCTTGCGGGATTGTGACTCTTTGTCCCGGCCATTGTAGCACA 12126 Query 96 TGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTT 155 |||| |||| |||||||| ||||| ||||||||||||||| ||||||||||||| | Sbjct 12125 TGTGTCGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCT 12066 Query 156 TGTCAC 161 | |||| Sbjct 12065 TATCAC 12060 >seq1053 Length=39665 Score = 84.2 bits (92), Expect = 2e-14 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||| | ||||| ||| | ||| ||| |||| | ||||| |||||||| Sbjct 35853 CGAGTTGCAGCTTGCAATCTTAACTTAGGATGGGTTTT-TGGGGTAAGCTCACCCTCGCG 35795 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || | ||| || | |||| |||| || | ||||| || |||||||| || Sbjct 35794 GGATCGCGACCTTTTGTACCGGACATTATAGCATGTGTGTCTCCTAGGGCATAAGGGGCA 35735 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTC 159 ||| |||||||| |||||| ||||||||||||| || || Sbjct 35734 TGATGACTTGACRTCATCCTCACCTTCCTCCGGCTTATC 35696 >seq777 Length=60404 Score = 82.4 bits (90), Expect = 6e-14 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||| || ||||||| ||| | ||| ||| |||| ||| ||| |||| ||| Sbjct 51298 CGAGTTGCAGCCTGCAATCCGAACTGAGGATGGGTTTT-TGGGGTTATCTCACCCTTGCG 51356 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || | || ||| | |||||||| || | || |||| |||||||| || Sbjct 51357 GGATTTTTTTTCTTTGTCTCGGCCATTGTAGCACATTTGTTGCCCAGGGCATAAGGGGCA 51416 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTC 159 ||| ||| ||||||||||| ||||||||||| | || || Sbjct 51417 TGATGACGTGACGTCATCCTCACCTTCCTCCAGCTTATC 51455 >seq11253 Length=31082 Score = 78.8 bits (86), Expect = 8e-13 Identities = 108/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||| || | | ||| |||| ||||||| ||||||||| Sbjct 14467 CGAGTTGCAGCCTGCAATCAAAACAAAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 14408 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | || ||| | | |||||||| |||||| ||| |||| ||| ||| Sbjct 14407 GATCGCCATCCTTTTTCCTGGCCATTGTAGCTCGTGTGTCTCCCAGTGCATAGGGGGCAT 14348 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCG 152 || ||||||||||||||| |||||| ||||| Sbjct 14347 GATGACTTGACGTCATCCTCACCTTTCTCCG 14317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415812226180