Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq33171 86.0 4e-15 seq40995 77.0 2e-12 seq6579 73.4 3e-11 >seq33171 Length=8894 Score = 86.0 bits (94), Expect = 4e-15 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 2292 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCKA 2351 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 ||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 2352 YTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 2409 >seq40995 Length=1634 Score = 77.0 bits (84), Expect = 2e-12 Identities = 89/119 (75%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 175 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 234 Query 61 CTTTCGCATCTGCTCTAGT-TGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| | | |||| | | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 235 CTTTTGTTCCAGCTCGAATGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 293 >seq6579 Length=40900 Score = 73.4 bits (80), Expect = 3e-11 Identities = 87/118 (74%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || ||||||| |||||||| | |||||||||| || || || ||||||| | | Sbjct 10718 TAACTTTTATTCGTTGAGCTACGGCCCTTCCACTCGGCACCGTCGAATCACTAAGGCTGA 10659 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| | |||||| | || | ||| |||||||||| | ||| |||||||||||| Sbjct 10658 CTTTTGTCCCTGCTCGACGGGTGGGTCTTGCAATCAAGCTCCCTTCTGCCATTGCACT 10601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351846239800