Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq1597 114 3e-23 seq6348 93.3 9e-17 seq10114 89.7 1e-15 seq3428 89.7 1e-15 seq7353 87.8 4e-15 seq29185 84.2 5e-14 seq21450 82.4 2e-13 seq13517 82.4 2e-13 seq31070 78.8 2e-12 seq379 75.2 2e-11 >seq1597 Length=45438 Score = 114 bits (126), Expect = 3e-23 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || ||||| | | ||||| || | || |||||||||| |||| ||||| || Sbjct 2860 CCTTCTTCACTCACGTGATATTGCTGGATCGGGCTTTCGTCCATTGTCCAAGATTCCCCA 2801 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | ||| Sbjct 2800 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 2741 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 ||| | ||| |||| | | || ||| ||| ||||| ||| |||||||||| || Sbjct 2740 AAGACCAGCTAAGCATCATTGTCTTGGTCAGCCTTTACCTGGCCAACTACCTAATACTAC 2681 Query 285 GCA 287 ||| Sbjct 2680 GCA 2678 >seq6348 Length=76506 Score = 93.3 bits (102), Expect = 9e-17 Identities = 110/148 (74%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||| | | ||| | | ||||| | | ||| |||| || Sbjct 35119 AAAAGAAGTTCACGACCCGTGGGGC-TTCTACTTCCACGCGGCATTGCTCCGTCAGGCTT 35177 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||| |||||||||| | |||| ||| | ||||||||| Sbjct 35178 TCGCCCATTGTGGAAAATTCCCCACTACTGCCTCCCGCAAGAGTCTGGGCTGTGTCTCAG 35237 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGA 228 ||||| ||||| || | ||||||| || Sbjct 35238 TTCCAGTGTGGCTGATCATCCTCTCGGA 35265 >seq10114 Length=86065 Score = 89.7 bits (98), Expect = 1e-15 Identities = 78/96 (81%), Gaps = 1/96 (1%) Strand=Plus/Plus Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCG 192 |||| || ||| |||||| || || || |||||||||||||||||||||| ||| ||| Sbjct 17899 TCAGGCTTTCGCCCATTGCGGAAAATCCC-CACTGCTGCCTCCCGTAGGAGTCTGGGCCG 17957 Query 193 TGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGA 228 ||||||||| ||| ||||| || | ||||||| || Sbjct 17958 TGTCTCAGTMCCAGTGTGGCTGATCATCCTCTCGGA 17993 >seq3428 Length=26333 Score = 89.7 bits (98), Expect = 1e-15 Identities = 109/148 (74%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | ||| | ||||| ||| ||| | | | ||| ||| || Sbjct 576 AAAAGAAGTTCACGACTCGTGGG-CCTTCTACCTCCACTCAGCATTGCTCCATCAAGCTT 634 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| ||||||||||||||| |||||| ||| |||||||||| Sbjct 635 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGBAGGAGTCTGGGCCGTGTCTCAA 694 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGA 228 | ||| ||||| | | ||||||| || Sbjct 695 TCCCAGTGTGGCTAATCATCCTCTCGGA 722 >seq7353 Length=35121 Score = 87.8 bits (96), Expect = 4e-15 Identities = 156/228 (68%), Gaps = 19/228 (8%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| || ||| || | Sbjct 35045 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCAT-----------T 34997 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | ||||||| || || | |||| | ||||| ||| ||||| Sbjct 34996 GC------TTCTTCTCCGGGAAAAGAAKTTCACGACCCGTGGG-CCTTCTACCTCCACGC 34944 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || | | ||||| || ||| | |||| ||||||||||||| Sbjct 34943 GGCATTGCTTCGTCAGGCTTTTGCCCATTACGGAAAATTACCCACTACTGCCTCCCGTAG 34884 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGA 228 ||| |||| | |||||||||| ||| |||| || | |||||||||| Sbjct 34883 GAG-TTGGGCTGTGTCTCAGTCCCAGTGTGTCTGATCATCCTCTCAGA 34837 >seq29185 Length=17869 Score = 84.2 bits (92), Expect = 5e-14 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 145 CCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCC 204 |||||| |||| ||||| |||||||||| ||||| ||||| || |||||||||||| || Sbjct 2904 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCC 2845 Query 205 AATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCC 264 | ||||| || | ||| ||| | ||| |||| | || | || ||| |||| Sbjct 2844 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGATTTGTCAGCCTTTACGT 2785 Query 265 CGCCTACTACCTAATGGAACGCATCCCCATCGTACACCG 303 || |||||||||| ||||| | |||| ||| || Sbjct 2784 GACCAACTACCTAATACTACGCAGGCTCATCAAACAGCG 2746 >seq21450 Length=8556 Score = 82.4 bits (90), Expect = 2e-13 Identities = 76/97 (78%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 |||||| | | | ||| || | || ||| |||||| |||| ||||| |||| ||||| | Sbjct 131 TCACGCGATATTGATGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTRCTGCCCC 72 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGG 211 |||| ||||| || |||||||||||| ||| ||||| Sbjct 71 CCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGG 35 >seq13517 Length=39204 Score = 82.4 bits (90), Expect = 2e-13 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 154 AATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGG 213 || ||||| || ||||||||||||||||||| ||| |||||||||||| ||| ||||| Sbjct 26774 AAAATTCCCCATTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCT 26715 Query 214 GACCTTCCTCTCAGA 228 || | ||||||| || Sbjct 26714 GATCATCCTCTCGGA 26700 >seq31070 Length=10000 Score = 78.8 bits (86), Expect = 2e-12 Identities = 98/132 (74%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | || | || ||||| ||||| || | | ||| |||| || Sbjct 7535 AAAAGAAGTTCACGACCCAT-GAGCCTTCTACCTTCGCGAGATATTGCTCCGTCAGGCTT 7593 Query 141 TCG-TCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCA 199 | | | ||||| || |||||||||||||||||| | || ||| || |||||||||| Sbjct 7594 TTGCTACATTGTGAAAAATTCCTCACTGCTGCCTCTCATAAGAGCCTGTGCCGTGTCTCA 7653 Query 200 GTTCCAATGTGG 211 || ||||||||| Sbjct 7654 GTCCCAATGTGG 7665 >seq379 Length=12116 Score = 75.2 bits (82), Expect = 2e-11 Identities = 107/151 (71%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 145 CCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCC 204 |||||| ||| |||||||||| |||| | ||| ||||| | |||||||||||| | Sbjct 1765 CCATTGTTCAAGATTCCTCACTATTGCCCCTCGTGGGAGTCCGTGCCGTGTCTCAGTCCT 1824 Query 205 AATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCC 264 | ||||| || | ||| ||| | ||| |||| | |||| ||| ||| ||||| Sbjct 1825 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCT 1884 Query 265 CGCCTACTACCTAATGGAACGCATCCCCATC 295 || |||||||||| ||||| | |||| Sbjct 1885 GACCAACTACCTAATACTACGCAGGCTCATC 1915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068302003328