Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq38779 100 5e-19 seq33908 100 5e-19 seq45899 98.7 2e-18 seq25373 98.7 2e-18 seq22139 95.1 2e-17 seq42744 93.3 7e-17 seq38829 93.3 7e-17 seq38138 91.5 2e-16 seq40312 89.7 8e-16 seq24073 86.0 1e-14 seq43850 84.2 4e-14 seq34974 84.2 4e-14 seq35997 82.4 1e-13 seq37551 80.6 4e-13 seq25375 80.6 4e-13 seq12213 78.8 2e-12 seq34361 77.0 5e-12 seq25376 77.0 5e-12 seq32980 75.2 2e-11 seq31105 75.2 2e-11 >seq38779 Length=1154 Score = 100 bits (110), Expect = 5e-19 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | ||||||| | ||| | ||| || |||| Sbjct 792 GTACGAGAGGAACCGTTGA-TTCATA-TAATTGGCCATCGCGCATCGTTGAAAAGCCAGT 849 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | || ||||||||| | |||||||||||| |||||||||||||||||||||||| Sbjct 850 GGCGTGAAGCTACCCTATGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCC 903 >seq33908 Length=15182 Score = 100 bits (110), Expect = 5e-19 Identities = 97/122 (80%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTG 61 || ||||||||||| || |||| | |||||| | ||| || ||| || ||||| Sbjct 1389 TAAGAGAGGAACCGTTGA-TTCACAC-AATTGGCCATCGCGCTTGGTTGAAAAGCCAGTG 1332 Query 62 CCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAG 121 || ||||||||||| |||||||||||| |||||||| |||||||||||||||| || || Sbjct 1331 GCGTGAAGCTACCATGTGCTGGATTATGACTGAACGCATCTAAGTCAGAATCCAGGCTAG 1272 Query 122 AA 123 || Sbjct 1271 AA 1270 >seq45899 Length=1087 Score = 98.7 bits (108), Expect = 2e-18 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | ||| || | | | || ||| || |||| Sbjct 13 GTACGAGAGGAACCGTTGA-TTCACACAAAT-GGCCATCGTGCTTGGTTGAAAAGCCAGT 70 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | ||| |||||||| |||||||||||| ||||||||||||||||||||||||| || | Sbjct 71 GACACGATGCTACCATATGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAGGCTA 130 Query 121 GAA 123 ||| Sbjct 131 GAA 133 >seq25373 Length=6275 Score = 98.7 bits (108), Expect = 2e-18 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||| || || |||| | ||||||| | ||| | ||| || |||| Sbjct 489 GTACGAGAGGAATCGTTGA-TTCATA-TAATTGGCCATCGCGCATCGTTGAAAAGCCAGT 432 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||| |||||||||||| ||||||||||||||| ||||||| || | Sbjct 431 GGCGCGAAGCTACCATGTGCTGGATTATGATTGAACGCCTCTAAGTTAGAATCCGGGCTA 372 Query 121 GAA 123 ||| Sbjct 371 GAA 369 >seq22139 Length=11261 Score = 95.1 bits (104), Expect = 2e-17 Identities = 91/114 (80%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||| ||||| || |||| || |||||| | | || ||| || |||| Sbjct 9754 GTACGAGAGTAACCGTTGA-TTCA-AACAATTGGCCATCTAGCTTGGTTGAAAAGCCAGT 9697 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||| | |||||||||||| |||||||||||||||||||||||| Sbjct 9696 GGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCC 9643 >seq42744 Length=3517 Score = 93.3 bits (102), Expect = 7e-17 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | ||||||| | ||| | ||| | ||| Sbjct 2810 GTACGAGAGGAACCGTTGA-TTCATA-TAATTGGCCATCGCGCATCGTTGAAAATCTAGT 2753 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | || ||||||||| | |||||||||||| |||||||||||||||||||||||| || | Sbjct 2752 GGCGTGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 2693 Query 121 GAA 123 ||| Sbjct 2692 GAA 2690 >seq38829 Length=1705 Score = 93.3 bits (102), Expect = 7e-17 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||||| || |||| | || ||| | | | || ||| || |||| Sbjct 1040 GTATGAGAGGAACCGTTGA-TTCACAC-AACTGGCCATCGTGCTTGGTTGAAAAGCCAGT 983 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | |||||||||||| |||||||||||||||||||||||| || | Sbjct 982 GGCGCGAAGCTACCGTATGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 923 Query 121 GAA 123 ||| Sbjct 922 GAA 920 >seq38138 Length=1490 Score = 91.5 bits (100), Expect = 2e-16 Identities = 95/122 (78%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTG 61 ||||||||||||| || |||| | |||||| | | | || ||| || ||||| Sbjct 311 TACGAGAGGAACCATTGA-TTCACAC-AATTGGCCGTCGTGCTTGGTTGAAAAGCCAGTG 254 Query 62 CCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAG 121 | ||| |||||||| |||||||||||| ||||||||||||||||||||||||| | || Sbjct 253 ACACGATGCTACCATATGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAGTCTAG 194 Query 122 AA 123 || Sbjct 193 AA 192 >seq40312 Length=4246 Score = 89.7 bits (98), Expect = 8e-16 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||| ||||| || ||| || ||| Sbjct 2321 GTACGAGAGGAACCGTTGA-TTCACAG-AATTGGCCATTGCGCTTGGTTGAAAAGTTAGT 2378 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||||||| || | | ||||| |||||| ||| |||||||||||||||||||| || | Sbjct 2379 GGCGCGAAGTTAACGTGTGCTGTATTATGACTGCACGCCTCTAAGTCAGAATCCGGGCTA 2438 Query 121 GAA 123 ||| Sbjct 2439 GAA 2441 >seq24073 Length=6507 Score = 86.0 bits (94), Expect = 1e-14 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||||| |||||||||||| | |||||||||||| |||||||||||||||| |||||| Sbjct 5432 AGCCAGTGGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTTAGAATC 5491 Query 114 CATGCCAGAA 123 | || |||| Sbjct 5492 CGGGCTAGAA 5501 >seq43850 Length=1905 Score = 84.2 bits (92), Expect = 4e-14 Identities = 88/113 (78%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||| | || | ||| || |||| Sbjct 1067 GTACGAGAGGAACCGTTGA-TTCATA-TAATTGACCATCGCTCATCGTTGAAAAGCCAGT 1010 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 | |||||||||||| | |||||||||||| ||||||||||||||||| |||| Sbjct 1009 GGCGCGAAGCTACCGTGTGCTGGATTATGAGTGAACGCCTCTAAGTCACAATC 957 >seq34974 Length=1279 Score = 84.2 bits (92), Expect = 4e-14 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | ||||||| | ||| | ||| || ||| Sbjct 168 GTACGAGAGGAACCGTTGA-TTCATA-TAATTGGCCATCGCGCATCGTTGAAAAGCAAGT 111 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| |||||| | | | |||||||||| |||||||||||||||||| ||||| || | Sbjct 110 GGCGCAAAGCTATCGTGTACTGGATTATGACTGAACGCCTCTAAGTCAAAATCCGGGCTA 51 Query 121 GAA 123 ||| Sbjct 50 GAA 48 >seq35997 Length=5405 Score = 82.4 bits (90), Expect = 1e-13 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||||| |||||||||| | | || ||||||||| ||||||||||||||||||||||| Sbjct 247 AGCCAGTGGCGCGAAGCTATCGTGTGATGGATTATGACTGAACGCCTCTAAGTCAGAATC 306 Query 114 CATGCCAGAA 123 | || |||| Sbjct 307 CGGGCTAGAA 316 >seq37551 Length=1362 Score = 80.6 bits (88), Expect = 4e-13 Identities = 87/113 (77%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||| |||| || |||| | ||||||| ||| | ||| || |||| Sbjct 677 GTACGAGAGGCACCGTTGA-TTCATA-TAATTGGCCACCGCGCATCGTTGAAAAGCCAGT 620 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 | |||||||||| | | || ||||||||| |||||| |||||||||||||||| Sbjct 619 GGCGCGAAGCTAGCGTGTGATGGATTATGACTGAACACCTCTAAGTCAGAATC 567 >seq25375 Length=1491 Score = 80.6 bits (88), Expect = 4e-13 Identities = 93/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||| | || || ||| || ||| Sbjct 555 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGCCATCACGCTTGGTTGAAAAGATAGT 612 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | ||||||||| | |||||||||||| ||||| ||||||||||||||||| || | Sbjct 613 GGCATGAAGCTACCGTGTGCTGGATTATGAATGAACACCTCTAAGTCAGAATCCGGGCTA 672 Query 121 GAA 123 ||| Sbjct 673 GAA 675 >seq12213 Length=42863 Score = 78.8 bits (86), Expect = 2e-12 Identities = 86/112 (77%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||| | || |||| ||||||||| | || || | | |||| || Sbjct 11342 GTACGAGAGGAATTGTTGA-TTCA-AATAATTGGCCATCGCTCATGGTTTAAAAGGCCGT 11399 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 | |||||||||||||| ||||||||||| |||| |||||||||| ||||| Sbjct 11400 GGCGCGAAGCTACCATGTGCTGGATTATTAGTGAATGCCTCTAAGTAAGAAT 11451 >seq34361 Length=12192 Score = 77.0 bits (84), Expect = 5e-12 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 ||||| || |||||||||||||| |||||||||||| || ||| ||||||||| ||||| Sbjct 11245 AGGCATTGGCGCGAAGCTACCATGTGCTGGATTATGACTTAACACCTCTAAGTGAGAATT 11304 Query 114 CATGCCAGAA 123 | || |||| Sbjct 11305 CGGGCTAGAA 11314 >seq25376 Length=19113 Score = 77.0 bits (84), Expect = 5e-12 Identities = 69/87 (79%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 27 ATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATT 86 |||||||| ||||| | ||| || ||||| |||||||||||| | ||| ||||| Sbjct 11942 ATAATTGGCCATTGCGCTTTGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCAGGATT 11883 Query 87 ATGGCTGAACGCCTCTAAGTCAGAATC 113 ||| ||||| |||||||||||||||| Sbjct 11882 ATGAATGAACACCTCTAAGTCAGAATC 11856 >seq32980 Length=6790 Score = 75.2 bits (82), Expect = 2e-11 Identities = 86/113 (76%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||| |||||||||| | |||| | ||||||| | || | ||| || |||| Sbjct 5744 GTACAAGAGGAACCGTTTA-TTCACA-TAATTGGCCATCACGCTTTGTTGAAAAGCCAGT 5801 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 | | |||||||||| | ||| |||||||| |||||| |||||||||||||||| Sbjct 5802 GGCACGAAGCTACCGTGTGCAGGATTATGACTGAACACCTCTAAGTCAGAATC 5854 >seq31105 Length=2304 Score = 75.2 bits (82), Expect = 2e-11 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 || || |||||||||| | | |||||||||||| |||||||||||||||||||||| Sbjct 1041 CAATGACGCGAAGCTATCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAAT 986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818830230016