Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4177 183 2e-41 >seq4177 Length=96264 Score = 183 bits (202), Expect = 2e-41 Identities = 581/885 (66%), Gaps = 18/885 (2%) Strand=Plus/Plus Query 61053 TCGTTTC-GTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGG 61111 ||| ||| |||| |||||| || ||||| | |||||| |||||||| || || Sbjct 66377 TCGATTCTGTAT-GTTCCCAATTCAGTATCCACAGATTTGGGAGATGTACAAGAAAGCCA 66435 Query 61112 AAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGC 61171 || || ||||||||||| || || |||||| | |||| || | | ||||||| Sbjct 66436 TGGCATCTTTCTGGACGGTAGAAGAAGTCGATCTCTCCACCGATACTCGTCACTGGGAAA 66495 Query 61172 GTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGG 61231 || | ||||||| |||||||| | ||||| | || || |||||||| || | Sbjct 66496 ACCTAACATCCGGTGAAAGGCATTTCATCACTCATGTTCTTGCCTTTTTTGCCGCCTCAG 66555 Query 61232 ACGGTATCGTCAATGAGAATTTAT-TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAG 61290 |||| || || ||||| | ||||| ||| | | | || || || || | ||| Sbjct 66556 ACGGCATAGTTTTAGAGAACCTCGCTGGAAGGTT-CATGAAAGATGTCCAGGTTGCCGAG 66614 Query 61291 GCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGT 61350 || ||| |||||| || ||||| || ||||| |||||| |||| || |||||||||||| Sbjct 66615 GCTCGTGCTTTCTATGGGTTCCAAATCGCCATTGAGAATATCCATTCCGAGATGTACAGT 66674 Query 61351 GTTCTCATCGATACGTACATCAGGGA-GCGGGCGGAACGTGAACGATTGTTCAATGCCAT 61409 | || | || ||||||||| ||| | | || || | | | ||||||| ||| || Sbjct 66675 TTGCTGTTGGAGTCGTACATCAAGGATTCTGACGAAAAGAGCA-AATTGTTCCGTGCAAT 66733 Query 61410 CGAGACGATACC-GGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATC-ACCAGT 61467 ||||| || || | | |||| ||| ||| | |||||| | ||||||| | || Sbjct 66734 TGAGACAATCCCTTGTGTTGAA-AAGAAGGCGAAATGGGCCCTTCGTTGGATCGATGGGT 66792 Query 61468 ACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTC 61527 | | || || | || || ||| |||| ||||| || || || | || ||| Sbjct 66793 ----CTGAAACTTTCGCGGAGCGTTTGGTGGCTTTTGCTTGTGTTGAAGGGATTTTCTTC 66848 Query 61528 AGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACC 61587 || ||| || | || ||||||||||| ||||| || | ||||| || | ||| Sbjct 66849 AGCGGAAGCTTCTGTTCGATATTTTGGTTGAAAAAACGGGGGTTAATGCCTGGATTAACC 66908 Query 61588 TTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTA 61647 ||| |||||||| || ||| | ||||| || |||| ||||||||||| |||||| Sbjct 66909 TTCTCAAATGAGTTAATTTCAAGAGACGAAGGTTTGCACTGTGATTTTGCGTGTTTGCTT 66968 Query 61648 TTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAG 61707 | || | | | || | | |||||||| || | | |||||| || Sbjct 66969 TACA---GTTTGTTAAGGACGAAGCTAACTGAGGAGCGAGTCAGGGGAATTGTTGCAGAT 67025 Query 61708 GCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATG 61767 || || || ||| ||| || || ||| ||| | || | || | || ||| Sbjct 67026 GCTGTGGAGATAGAAAGGGAGTTCGTGTGTGATGCTCTTCCTTGTGCTCTGGTGGGAATG 67085 Query 61768 AATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTG 61827 ||| | | | ||| | || || || ||||| || ||| | |||||| | |||| Sbjct 67086 AATGGAGATTTGATGAGTAAATACATAGAGTTTGTAGCTGACAGATTGTTGGATGCTTTG 67145 Query 61828 GG-TATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCT 61886 || |||| | ||| || ||| | | || |||||||||| ||||| ||||| | Sbjct 67146 GGTTATG-ACAAGATGTACAATGCTCAGAATCCATTTGATTGGATGGAGCTGATTAGTTT 67204 Query 61887 GGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 | || ||||| ||||| || ||||| | || || || ||||| Sbjct 67205 ACAAGGGAAGACTAATTTCTTTGAGAAGAGAGTTGGGGAGTATCA 67249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397342235296160