Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq63570 77.0 3e-12 >seq63570 Length=2479 Score = 77.0 bits (84), Expect = 3e-12 Identities = 91/118 (77%), Gaps = 9/118 (8%) Strand=Plus/Minus Query 2 GCAGACGGTGGATGCCTAGGC-TCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 ||| ||||||||||||| ||| ||| |||| ||||||||||||| || |||||| ||| Sbjct 135 GCAAACGGTGGATGCCTTGGCATCT-GGAGCCGAAGAAGGACGTAGAAATCTGCGATAAG 77 Query 61 CTACGGGGATTGGCACATA--CGA--ATTGATCCGTAGATATCCGAATGGGGCAACCC 114 | |||||| || ||| ||| ||||||| ||| ||||||||||| ||||| Sbjct 76 CCTCGGGGA---GCTGATAATCGAGCTGTGATCCGAGGATTTCCGAATGGGGAAACCC 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476505935984