Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq2009 152 7e-35
seq63618 141 1e-31
seq18700 132 7e-29
seq63574 127 3e-27
seq44995 125 1e-26
seq31598 125 1e-26
seq33605 118 1e-24
seq53634 109 8e-22
seq25054 109 8e-22
seq4795 105 9e-21
seq18773 102 1e-19
seq14508 100 4e-19
seq35364 98.7 1e-18
seq22777 95.1 2e-17
seq8848 91.5 2e-16
seq970 91.5 2e-16
seq30334 86.0 9e-15
seq7811 77.0 5e-12
seq30734 73.4 5e-11
>seq2009
Length=74205
Score = 152 bits (168), Expect = 7e-35
Identities = 181/243 (74%), Gaps = 12/243 (5%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | ||
Sbjct 69111 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 69169
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
|||||||||| |||||||||||| ||| || | | ||| | | | |||| |
Sbjct 69170 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 69227
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | ||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 69228 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 69278
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
| || |||| | | | |||| |||||| |||||| || ||||||||||||||| |
Sbjct 69279 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 69338
Query 246 GTA 248
|||
Sbjct 69339 GTA 69341
>seq63618
Length=155458
Score = 141 bits (156), Expect = 1e-31
Identities = 177/243 (73%), Gaps = 20/243 (8%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| || ||||
Sbjct 155199 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 155257
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||||| ||
Sbjct 155258 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 155304
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 155305 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 155358
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| |||||||||||||||| |
Sbjct 155359 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 155418
Query 246 GTA 248
|||
Sbjct 155419 GTA 155421
>seq18700
Length=4494
Score = 132 bits (146), Expect = 7e-29
Identities = 179/248 (72%), Gaps = 30/248 (12%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||| ||||||| | |||||| | ||||| | ||| || ||||
Sbjct 3069 CCTTCCGACACTGGGCAAGCGTCAGCCTACATACATGGTCTTAC-GACTTTGCGGAGACC 3127
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCT---CTATTCTCTGCGACCACCACCAGCTCAAC 122
||||||||| |||||||||| |||| || || |||||||| ||
Sbjct 3128 TGTGTTTTTGGTAAACAGTC---TCCCGGGCCTGGTCACTGCGACCCCC----------- 3173
Query 123 ACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATT 182
|| | || || ||||||||||||||||||||||||||| |||||||||| ||
Sbjct 3174 ------TTTATGAGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTT 3225
Query 183 CCTTAACCACAGT--TCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240
||||| | ||| || |||| | ||| ||||||||||||| ||||||||||||||
Sbjct 3226 CCTTAGAGAGAGTTGTCTCCCG--CCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGT 3283
Query 241 TTACGGTA 248
|| ||||
Sbjct 3284 TTCGGGTA 3291
>seq63574
Length=3088
Score = 127 bits (140), Expect = 3e-27
Identities = 174/243 (72%), Gaps = 20/243 (8%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||| ||||| || ||||||| | ||||| | | | || ||||
Sbjct 164 CCTTCCGGCACTGGGCAGGTGTCAGCCCCTATACATGGTCTTAC-GACATTGCGGAGACC 222
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| ||||||||||||| || || |||||||| |
Sbjct 223 TGTGTTTTTGGTAAACAGTCGCTCGGGCCTGGTCACTGCGACCCCTT------------- 269
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||| ||||||||||||||||||||||| ||||||| || |||||
Sbjct 270 TTGTG----AGGAG--GCATCCCTTCTCCCGAAGTTACGGGGCTATTTTGCTGAGTTCCT 323
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| |||||||||||||||| |
Sbjct 324 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 383
Query 246 GTA 248
|||
Sbjct 384 GTA 386
>seq44995
Length=14328
Score = 125 bits (138), Expect = 1e-26
Identities = 172/238 (72%), Gaps = 12/238 (5%)
Strand=Plus/Plus
Query 11 CATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTGT 70
|| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | |||||||
Sbjct 523 CAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCCTGTGT 581
Query 71 TTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTCGTT 130
||||| |||||||||||| | | || | | ||| | | | |||| | |
Sbjct 582 TTTTAATAAACAGTCGCTACACCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGAT---- 635
Query 131 CACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACC 190
|| || | || |||||||||||||||||||||| ||||||| ||| |||||| |
Sbjct 636 ----AGGAGAG-CAGCCCTTCTCCCGAAGTTACGGGGTCATTTTGTCGAGTTCCTTCGAC 690
Query 191 ACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
| |||| | | | | || |||||| |||||| || ||||||||||||||| ||||
Sbjct 691 ATGGTTCTCTCAAGCACCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTA 748
>seq31598
Length=5730
Score = 125 bits (138), Expect = 1e-26
Identities = 175/248 (71%), Gaps = 22/248 (9%)
Strand=Plus/Plus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| |||||| ||| |||||||||||| || |||||| | ||| | | ||| ||
Sbjct 3956 CTTAACCTTCCGGCACTGGGCAGGCGTCAACCCCCATACATGGTCTTTC-GACTTTGCGG 4014
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
||||||||||||| |||||||||||| || || |||||||| ||
Sbjct 4015 AGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT-------- 4066
Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180
| || || |||||||||||| |||||||||||||| ||||||||||
Sbjct 4067 -----------ATGAGGAG--GCACCCCTTCTCTCGAAGTTACGGGGCTATTTTGCCGAG 4113
Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240
||||||| | |||| | | | ||| ||||||||||||| ||||||||||||||
Sbjct 4114 TTCCTTAGAGAGAGTTGTCTTGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGT 4173
Query 241 TTACGGTA 248
|| ||||
Sbjct 4174 TTCGGGTA 4181
>seq33605
Length=15801
Score = 118 bits (130), Expect = 1e-24
Identities = 174/244 (71%), Gaps = 22/244 (9%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||
Sbjct 4459 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGATACC 4517
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| ||||||||||||| || || |||| ||| ||
Sbjct 4518 TGTGTTTTTGGTAAACAGTCGCTCGAACCTGGTCACTGCAACCCCCT------------- 4564
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || |||||||||||| ||||||||||||| |||||||||| |||||
Sbjct 4565 TTGTG----AGGAG--GCACCCCTTCTCTAGAAGTTACGGGGCTATTTTGCCGAGTTCCT 4618
Query 186 TAACCACAGTTCACCCGAACGCCTTA-GTATTCTCTACCTGACCACCTGTGTCGGTTTAC 244
|| |||| | | | ||||| ||||||||||||| ||||||||||||||||
Sbjct 4619 TAGAGTGAGTTGTCTCTCTC-CCTTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCG 4677
Query 245 GGTA 248
||||
Sbjct 4678 GGTA 4681
>seq53634
Length=1336
Score = 109 bits (120), Expect = 8e-22
Identities = 89/108 (82%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||||||||||||||||| |||||||||| |||||||| | |||| |
Sbjct 7 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAAAGAGAGTTGTCT 66
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|| | ||| ||||||||||||| |||||| |||| |||| ||||
Sbjct 67 CGCGCCCCTAGGTATTCTCTACCTACCCACCTATGTCAGTTTCGGGTA 114
>seq25054
Length=11687
Score = 109 bits (120), Expect = 8e-22
Identities = 172/244 (70%), Gaps = 23/244 (9%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||| |||||||||||| || ||||||| | ||||| ||| || |||
Sbjct 2585 CCTTCCAACACTAGGCAGGCGTCAGCCCCTATACATGGTCTTACAA-CTTTGCGAAAACC 2643
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||||| ||
Sbjct 2644 TGTGTTTTTGGTAAACAGTCGCCCAAGCCTGGTCACTGCGACCCCCT------------- 2690
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || |||| |||| || | ||||||||||| |||||||||| |||||
Sbjct 2691 TTGTG----AGGAG--GCACTCCTTTTCTCAAAGTTACGGGGTTATTTTGCCGAGTTCCT 2744
Query 186 TAACCACAGTTCACCCGAACGCCTTA-GTATTCTCTACCTGACCACCTGTGTCGGTTTAC 244
||| |||| | || ||||||| ||||| ||||||| |||||||||| |||||
Sbjct 2745 TAAAGTGAGTTGTCTCG--CGCCTTAGGTATTTTCTACCTACCCACCTGTGTGGGTTTCG 2802
Query 245 GGTA 248
||||
Sbjct 2803 GGTA 2806
>seq4795
Length=34475
Score = 105 bits (116), Expect = 9e-21
Identities = 88/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
||||||||||||||||||||||||||| |||||||||| ||||||| | |||| |
Sbjct 21859 GGCACCCCTTCTCCCGAAGTTACGGGGTTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 21918
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|| | ||| ||||||||||||| ||||||| |||||||| ||||
Sbjct 21919 CGCGCCCCTAGGTATTCTCTACCTACCCACCTGCGTCGGTTTTGGGTA 21966
>seq18773
Length=48831
Score = 102 bits (112), Expect = 1e-19
Identities = 169/243 (70%), Gaps = 21/243 (9%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||| ||| |||||||||| | || |||||| | |||| | ||| ||| ||||
Sbjct 22076 CCTTCTGGCACTGGGCAGGCGTTAACCCCCATACATGGTCTTAT-GACTTTGCAGAGACC 22134
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||| ||| ||
Sbjct 22135 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCTACCCCCT------------- 22181
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||||||||||||||||||||||||||| || || |||| |||||
Sbjct 22182 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATGTTTCCGAGTTCCT 22235
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| ||||||||||| ||| |
Sbjct 22236 TAGATAGAGTTGTCTCG-CCACCTAGGTATTCTCTACCTACCCACCTGTGTCAATTTCGG 22294
Query 246 GTA 248
|||
Sbjct 22295 GTA 22297
>seq14508
Length=424938
Score = 100 bits (110), Expect = 4e-19
Identities = 169/243 (70%), Gaps = 20/243 (8%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| ||| || ||||
Sbjct 269873 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACAA-CTTTGCGGAGACC 269815
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || | ||||| || || |
Sbjct 269814 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTTACTGCGGCCCCCTTT----------G 269765
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || | ||| ||||||||||| |||||||| |||| |||||||||| || ||
Sbjct 269764 T-GT------GTAGTA--ACCCCTTCTCCTGAAGTTACAGGGCTATTTTGCCGAGTTTCT 269714
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| | |||||||||||||| |
Sbjct 269713 TAGAGAGAGTTATCTCGCGCCCCTAGGTATTCTCTACCTACCAACCTGTGTCGGTTTTAG 269654
Query 246 GTA 248
|||
Sbjct 269653 GTA 269651
>seq35364
Length=4373
Score = 98.7 bits (108), Expect = 1e-18
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201
|||||| ||||||||||||||||||| |||||||| || |||||| || |||| | |
Sbjct 526 GCACCCTTTCTCCCGAAGTTACGGGGTCATTTTGCTGAGTTCCTTCGACATGGTTCTCTC 467
Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
| ||| |||||| |||||| || ||||||||||||||| ||||
Sbjct 466 AAGTGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTA 420
>seq22777
Length=7833
Score = 95.1 bits (104), Expect = 2e-17
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201
|||||| |||||||||||||| |||| |||||||| || |||||| | || |||| | |
Sbjct 242 GCACCCTTTCTCCCGAAGTTATGGGGTCATTTTGCTGAGTTCCTTCAACATGGTTCTCTC 301
Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
| |||| |||||| |||||| || ||||||||| |||| ||||
Sbjct 302 AAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTTAGTTTGGGGTA 348
>seq8848
Length=272636
Score = 91.5 bits (100), Expect = 2e-16
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||| |||||||||||| |||||||||| ||||||| | |||| |
Sbjct 150310 GGCACCCCTTCTCCTGAAGTTACGGGGATATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 150369
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|| | ||| ||||||||||||| | || |||||| |||| ||||
Sbjct 150370 CGCGCCCCTAGGTATTCTCTACCTACCAACTTGTGTCAGTTTTGGGTA 150417
>seq970
Length=24556
Score = 91.5 bits (100), Expect = 2e-16
Identities = 166/243 (68%), Gaps = 20/243 (8%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|| |||| ||| |||||||||||| || |||||| | ||||| | ||| ||| ||||
Sbjct 10787 CCCTCCAGCACTGGGCAGGCGTCAACCCCCATACATGGTCTTAC-GACTTTGCAAAGACC 10845
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
| ||||||| |||||||||| | || || || ||||| ||
Sbjct 10846 TATGTTTTTGGTAAACAGTCACCCAGGCCTGCTCACTACGACCCCCT------------- 10892
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || |||||| |||||| ||||||| | ||| |||||| || |||||
Sbjct 10893 TTGTG----AGGAG--GCACCCTTTCTCCTGAAGTTATGAGGCTATTTTGTTGAGTTCCT 10946
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | | || | || || ||| ||||||||||||| |||||| |||| |||| |
Sbjct 10947 TAGAGAGATTTATCTCGCACCCCTAGGTATTCTCTACCTACCCACCTATGTCAGTTTCAG 11006
Query 246 GTA 248
|||
Sbjct 11007 GTA 11009
>seq30334
Length=63162
Score = 86.0 bits (94), Expect = 9e-15
Identities = 161/237 (68%), Gaps = 20/237 (8%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||| | ||| |||||||||| || || |||||| | ||||| | ||| || |||
Sbjct 24665 CCTTTCGGCACTGGGCAGGCGTTAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACA 24607
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| ||||| |||||| || || |||||||| ||
Sbjct 24606 TGTGTTTTTGGTAAATAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 24560
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || |||||||||||| |||||||||||| ||||| | || |||||
Sbjct 24559 TTGTG----AGGAG--GCACCCCTTCTCACGAAGTTACGGGCTTATTTTTCTGAGTTCCT 24506
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242
|| | |||| | || | ||| ||||||||||||| |||| ||||| ||||
Sbjct 24505 TATAGAGAGTTGTCTCGTGCCCCTAGGTATTCTCTACCTACCCACTTGTGTTAGTTT 24449
>seq7811
Length=130229
Score = 77.0 bits (84), Expect = 5e-12
Identities = 81/107 (76%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201
|||||||||||| | ||||||| |||| || |||| || ||||||| | || | | |
Sbjct 30119 GCACCCCTTCTCTCAAAGTTACTGGGCTATATTGCTGAGTTCCTTAGAGAGAGCTGTCGC 30060
Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
| | ||| ||||||||||||| |||||||||||| || ||||
Sbjct 30059 GTGCCCCTAGGTATTCTCTACCTACTCACCTGTGTCGGCTTCAGGTA 30013
>seq30734
Length=51844
Score = 73.4 bits (80), Expect = 5e-11
Identities = 43/45 (96%), Gaps = 0/45 (0%)
Strand=Plus/Plus
Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTT 186
|||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 34392 GCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTT 34436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 693971732272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |