Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq63618 93.3 4e-17 seq18700 87.8 2e-15 seq25054 86.0 7e-15 seq2009 86.0 7e-15 seq14508 84.2 2e-14 seq35364 82.4 8e-14 seq22777 82.4 8e-14 seq18773 82.4 8e-14 seq31598 80.6 3e-13 seq63574 78.8 1e-12 seq11497 78.8 1e-12 seq8848 78.8 1e-12 seq44485 77.0 3e-12 seq44995 73.4 4e-11 seq33605 73.4 4e-11 >seq63618 Length=155458 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 155360 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 155303 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 155302 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 155253 >seq18700 Length=4494 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 3230 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCATAAA--G 3173 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || || |||||||| |||||||||||| || Sbjct 3172 GGGGTCGCAGTGACCAGGCCCGGGAGACTGTTTACCAAAAACACAGGTCT 3123 >seq25054 Length=11687 Score = 86.0 bits (94), Expect = 7e-15 Identities = 121/164 (74%), Gaps = 7/164 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATAC-TAAGGCGCTTGAGTGAA-TCACGGTTAA 82 |||| ||||| || | ||| ||| |||| |||||||| ||| || |||| |||| Sbjct 2800 AAACCCACACAGGTGGGTAGGTAGAAAATACCTAAGGCGC--GAGACAACTCACT-TTAA 2744 Query 83 GGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAG 142 |||||| |||||| | |||| ||||||| | || || | || ||| | || ||| ||| Sbjct 2743 GGAACTCGGCAAAATAACCCCGTAACTTTGAGAAAAGGAGTGCCTCCTCACAAAGGGG-- 2686 Query 143 GGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGG 186 | ||||| || ||| ||| |||||||| |||||||||||| Sbjct 2685 GTCGCAGTGACCAGGCTTGGGCGACTGTTTACCAAAAACACAGG 2642 >seq2009 Length=74205 Score = 86.0 bits (94), Expect = 7e-15 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| |||||||||| ||| || | ||| Sbjct 69336 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 69277 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| |||||| |||||||||||| || |||| Sbjct 69276 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 69237 >seq14508 Length=424938 Score = 84.2 bits (92), Expect = 2e-14 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 |||| |||| |||||| | |||||||||||| ||| || |||| |||| || ||| | Sbjct 269712 TAAGAAACTCGGCAAAATAGCCCTGTAACTTCAGGAGAAGGGGTTACTACACACAAA--G 269769 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| | ||| || ||| |||||||| |||||||||||| || Sbjct 269770 GGGGCCGCAGTAACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 269819 >seq35364 Length=4373 Score = 82.4 bits (90), Expect = 8e-14 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| ||| |||||| ||| || | ||| Sbjct 425 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCACTTGAGAGAACCATGTCGAAG 484 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| ||||| |||||| |||||||||||| ||||||| Sbjct 485 GAACTCAGCAAAATGACCCCGTAACTTCGGGAGAAAGGGT 524 >seq22777 Length=7833 Score = 82.4 bits (90), Expect = 8e-14 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| ||||| || | || || ||||||| |||||||||| ||| || | | ||| Sbjct 343 CAAACTAACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTTGAAG 284 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| ||||| |||||| ||||||||||| ||||||| Sbjct 283 GAACTCAGCAAAATGACCCCATAACTTCGGGAGAAAGGGT 244 >seq18773 Length=48831 Score = 82.4 bits (90), Expect = 8e-14 Identities = 89/117 (76%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| || || | ||| |||||||||||| || |||| ||| | || ||| || Sbjct 22237 TAAGGAACTCGGAAACATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAGGG 22178 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | | |||| || ||| || ||| |||||||| |||||||||||| || ||| || Sbjct 22177 G--GTAGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCTGCAAA 22123 >seq31598 Length=5730 Score = 80.6 bits (88), Expect = 3e-13 Identities = 84/110 (76%), Gaps = 4/110 (4%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| ||||||||| || || |||| ||| | || | | Sbjct 4120 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGAGAGAAGGGGTGCCTCCTCATA----G 4065 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 4064 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 4015 >seq63574 Length=3088 Score = 78.8 bits (86), Expect = 1e-12 Identities = 84/110 (76%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| ||||| | ||| |||||||||||| || || | ||| | || ||| || Sbjct 325 TAAGGAACTCAGCAAAATAGCCCCGTAACTTCGGGAGAAGGGATGCCTCCTCACAAAAGG 266 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || ||||| || ||| || || |||||||| |||||||||||| || Sbjct 265 --GGTCGCAGTGACCAGGCCCGAGCGACTGTTTACCAAAAACACAGGTCT 218 >seq11497 Length=37298 Score = 78.8 bits (86), Expect = 1e-12 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| | ||| | ||||||||||||| | | || |||| |||| || ||| | Sbjct 14090 TAAGGAACTCGATAAAATAACCCTGTAACTTCAGCAGAAGGGGTGCCTATTCACAAA--G 14147 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | || ||||| || |||| |||||| ||| | | ||||||||||| || ||| || Sbjct 14148 GTGGCCGCAGTGACTAGGCCCAGGCGACTACTCACTAAAAACACAGGTCTCTGCAAA 14204 >seq8848 Length=272636 Score = 78.8 bits (86), Expect = 1e-12 Identities = 84/110 (76%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||| ||| || |||| ||| |||||| | Sbjct 150356 TAAGGAACTCGGCAAAATATCCCCGTAACTTCAGGAGAAGGGGTGCCTCATCAGAAA--G 150299 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 |||| ||||| || | | | ||| || ||||| |||||||||||| || Sbjct 150298 GAGGTCGCAGTGACCAAGCACGGGCGACGGTTTACCAAAAACACAGGTCT 150249 >seq44485 Length=1706 Score = 77.0 bits (84), Expect = 3e-12 Identities = 85/111 (77%), Gaps = 3/111 (3%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG-TCCCTACCCAGAAATG 138 ||||||||| | ||| | ||||||||||||| | | |||||| | |||| || ||| Sbjct 352 TAAGGAACTCGATAAAATAACCCTGTAACTTCAGCAGAAAGGGGTGCCTATTCACAAA-- 295 Query 139 GGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || || ||||| || |||| |||||| ||| | | |||||||||||| || Sbjct 294 GGTGGCCGCAGTGACTAGGCCCAGGCGACTACTCACCAAAAACACAGGTCT 244 >seq44995 Length=14328 Score = 73.4 bits (80), Expect = 4e-11 Identities = 75/98 (77%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| || ||||||| ||| || | ||| Sbjct 743 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGTGCTTGAGAGAACCATGTCGAAG 684 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGG 121 ||||| | |||| |||||| |||||||||||| || || Sbjct 683 GAACTCGACAAAATGACCCCGTAACTTCGGGAGAAGGG 646 >seq33605 Length=15801 Score = 73.4 bits (80), Expect = 4e-11 Identities = 81/107 (76%), Gaps = 2/107 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||| || || |||| ||| | || ||| || Sbjct 4620 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCTAGAGAAGGGGTGCCTCCTCACAAAGGG 4561 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGG 186 | | |||| || |||| | || |||||||| |||||||||||| Sbjct 4560 G--GTTGCAGTGACCAGGTTCGAGCGACTGTTTACCAAAAACACAGG 4516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530872385056