Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq2846 374 2e-101 >seq2846 Length=62821 Score = 374 bits (414), Expect = 2e-101 Identities = 248/275 (90%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 1 CGAGTCAATGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGG 60 |||| || |||||||||||||||||||||||| | |||||||||||||| | ||||||| Sbjct 34886 CGAGCCAGTGTCCTAGGGCATGTGTAGGGGTGAGCAAAAATGGAAATTTAACTTGTTGGG 34827 Query 61 GAGAGTCCGACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCT 120 ||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 34826 CAGAATCCGACCCGAATGTTAAAGTCGGAGCATGTGGTGTGGATCTTGGTGATCGGACCT 34767 Query 121 TGGTTACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACA 180 ||||||||||||||| |||||||| ||||| ||||||||||| || ||| | ||||||| Sbjct 34766 TGGTTACCGGGTCGGCCTATCAAGGTGCCCCGCATGGGTTCTTTTTCGTAGAAAACAACA 34707 Query 181 AAAAGGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGAT 240 |||| || || ||||| ||||||||||||||||| ||||||||||||||||||| |||| Sbjct 34706 AAAAAGAAGGACAAAACAGTAAATTGACAAAGATAAATGTTCCTGATGAATTTTCAGGAT 34647 Query 241 TTGTGCAATCTGGATGCTGTGTGGAGATCTGAAAT 275 |||| |||||||||||||||||||||||||||||| Sbjct 34646 TTGTACAATCTGGATGCTGTGTGGAGATCTGAAAT 34612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917815309824