Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq13560 163 5e-38 seq17305 156 7e-36 seq63586 150 3e-34 seq63648 140 5e-31 seq63603 136 7e-30 seq21716 136 7e-30 seq63621 131 3e-28 seq15037 123 4e-26 seq63615 104 4e-20 seq7183 96.9 6e-18 seq10193 78.8 2e-12 >seq13560 Length=69095 Score = 163 bits (180), Expect = 5e-38 Identities = 207/285 (73%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 36434 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 36375 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 36374 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 36315 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | ||||| Sbjct 36314 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 36255 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| |||||| Sbjct 36254 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTA 36195 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||| ||||||||| ||||||||| ||| || Sbjct 36194 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 36150 >seq17305 Length=6328 Score = 156 bits (172), Expect = 7e-36 Identities = 208/288 (72%), Gaps = 6/288 (2%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 1650 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 1709 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| ||||| || | | |||| || Sbjct 1710 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTTTGCCCCTACCGTACTCCAG 1769 Query 126 AAAAACAGTTTCAAATGCAGGCTAT---GGGTTGAGCCCATAGTTTTCACATCTGACTTG 182 |||||| | || |||| ||||||||||| | ||| | | ||||| Sbjct 1770 CTTGGTAGTTTCCACCGC---CTATCTAGGGTTGAGCCCTGGGATTTAATGGCGGACTTA 1826 Query 183 CCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTA 242 || |||||| | |||||| |||||| | | |||||||||||||| ||| ||| Sbjct 1827 AAAAGCCACCTACAGACGCTTTACGCCCAATCATTTCGGATAACGCTTGCATCCTCTGTA 1886 Query 243 TTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||| ||||||||| ||||||||| ||||||||| ||| || Sbjct 1887 TTACCGCGGTTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 1934 >seq63586 Length=2304 Score = 150 bits (166), Expect = 3e-34 Identities = 207/288 (72%), Gaps = 6/288 (2%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 1356 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 1297 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 1296 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 1237 Query 126 AAAAACAGTTTCAAATGCAGGCTAT---GGGTTGAGCCCATAGTTTTCACATCTGACTTG 182 |||||| | || |||| ||||||||||| | ||| || | ||||| Sbjct 1236 CTTGGTAGTTTCCACCGC---CTATCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTA 1180 Query 183 CCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTA 242 || |||||| |||||| |||||| | |||||||||||||||| || ||| Sbjct 1179 AAAAGCCACCTACAGATGCTTTACGCCCAATCATTCCGGATAACGCTTGCATTCTCTGTA 1120 Query 243 TTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||| ||||||||||||||| ||||||||| ||||||||| ||| || Sbjct 1119 TTATCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 1072 >seq63648 Length=2714 Score = 140 bits (154), Expect = 5e-31 Identities = 204/286 (71%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| ||||| | | Sbjct 1128 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGCTATTT 1069 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 || |||||||||||||||||| ||| | |||||| |||| || | |||| || Sbjct 1068 TCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCATACTCCAG 1009 Query 126 AAAAACAGTTTCAAATGCAGG-CTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184 |||||| | || | ||| ||||||| ||| | ||| || | ||||| Sbjct 1008 CTTGGTAGTTTCCACCGCCTGTCTA-GGGTTGAACCCTGGGATTTGACGGCGGACTTAAA 950 Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244 || |||||| | |||||| |||||| | |||||||||||||||| ||| ||||| Sbjct 949 AAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTTTGTATT 890 Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||| ||||||| ||||||||| ||||||||| ||| || Sbjct 889 ACCGCGGCTACTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 844 >seq63603 Length=1268 Score = 136 bits (150), Expect = 7e-30 Identities = 198/277 (71%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 276 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 217 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 216 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 157 Query 126 AAAAACAGTTTCAAATGCAGG-CTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184 || ||| | || | ||| ||||||||||| | ||| || | ||||| Sbjct 156 CTTGGTAGCTTCCATCGCCTGTCTA-GGGTTGAGCCCTGGGATTTGACGGCGGACTTAAA 98 Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244 | |||||| ||||||||| ||| | |||||||||||||||| ||| ||||| Sbjct 97 AAGTCACCTACAGATGCTTTACACCTAATCATTCCGGATAACGCTTGCATCCTCTGTATT 38 Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATT 281 |||||||||||| |||| ||||||| | ||||||| Sbjct 37 ACCGCGGCTGCTAGCACAGAGTTAGCAGATGCTTATT 1 >seq21716 Length=6299 Score = 136 bits (150), Expect = 7e-30 Identities = 199/279 (71%), Gaps = 2/279 (1%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| |||| |||||| | | ||| || || |||||| |||||||| | Sbjct 2902 GCTTTCGTCTTTCAGTGTCAGTGTCGGCCCAACAGAGTGCTTTCGCCGTTGGTGTTCTTT 2961 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| |||||| |||| || | | |||| || Sbjct 2962 CCGATCTCTACGCATTTCACCGCTCCACCGAAAATTCCCTCTGCCCCTACCGTACTCCAG 3021 Query 126 AAAAACAGTTTCAAATG-CAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184 |||||| | || | | ||| ||||||||||| | ||| || | ||||| Sbjct 3022 CTTGGTAGTTTCCATTGCCTGTCTA-GGGTTGAGCCCTGGGATTTGACGGCGGACTTAAA 3080 Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244 | |||||| |||||| || ||| | |||||||||||||||| ||| ||||| Sbjct 3081 AAGTCACCTACAGATGCTTTACGCCTAATCATTCCGGATAACGCTTGCATCCTCTGTATT 3140 Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 |||||||||||| |||| ||||||||| ||||||||| Sbjct 3141 ACCGCGGCTGCTAGCACAGAGTTAGCCGATGCTTATTCC 3179 >seq63621 Length=23796 Score = 131 bits (144), Expect = 3e-28 Identities = 196/276 (71%), Gaps = 2/276 (1%) Strand=Plus/Plus Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75 ||||| |||||| | | |||||| || |||||| | |||||| | | || |||| Sbjct 23236 CTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTAGTGTTCTTTCCAATCTCTA 23295 Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135 |||||||||||||| ||| | ||||| |||| || | | |||| || |||| Sbjct 23296 CGCATTTCACCGCTCCACCAGAAATTCTCTCTGCCCCTACCGTACTCCAGCTTGGTAGTT 23355 Query 136 TCAAA-TGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTA 194 || | | | | ||| ||||||||||| | ||| | | ||||| || |||| Sbjct 23356 TCCACCTCCTGTCTA-GGGTTGAGCCCTGGGATTTGATGACGGACTTAAAAAGCCACCTA 23414 Query 195 CACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTG 254 || | ||||| |||||| | | ||||||||||||| ||| ||||||||||||||| Sbjct 23415 CAGACGCTTTATGCCCAATCATTTTGGATAACGCTTGCATCCTCTGTATTACCGCGGCTG 23474 Query 255 CTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||| ||||||||| |||||||| ||| || Sbjct 23475 CTGGCACAGAGTTAGCCGATTCTTATTCCCCAGATA 23510 >seq15037 Length=7840 Score = 123 bits (136), Expect = 4e-26 Identities = 196/281 (70%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||| || |||||||| | Sbjct 5629 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGTCATTGGTGTTCTTT 5570 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 || |||| ||||||||||||| ||| | |||||| ||||||| | |||| || Sbjct 5569 TCGATCTCTATGCATTTCACCGCTCCACCAGAAATTCCCTCTGCCTCTACCATACTCCAG 5510 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | || |||| ||| | ||| ||| | || Sbjct 5509 CTTGGTAGTTTCCACCGCCTGTCCAGGATTGATCCCTGGGATTTGACAATGAATTTAAAA 5450 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| |||||| |||||| | |||| ||||||||||| ||| |||||| Sbjct 5449 AGCCACCTACAGATGCTTTACGCCCAATCATTCCGAATAACGCTTGCATCCTCTGTATTA 5390 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCA 286 | |||||||||||||| ||||||||| |||||||||||| Sbjct 5389 CTGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCA 5349 >seq63615 Length=6963 Score = 104 bits (114), Expect = 4e-20 Identities = 167/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 2057 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 2116 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 2117 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 2176 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | ||||| Sbjct 2177 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 2236 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| | || || Sbjct 2237 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTGCCTAGTA 2296 >seq7183 Length=72717 Score = 96.9 bits (106), Expect = 6e-18 Identities = 187/275 (68%), Gaps = 1/275 (0%) Strand=Plus/Plus Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75 || || |||||| | | ||| ||| || ||| || |||||||| | | || ||| Sbjct 30035 CTTAGTGTCAGTATCGGCCCAACAAAGTGCTTTCACCGTTGGTGTTCTTTCCGATCTCTG 30094 Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135 ||||||||||| || ||| | |||||| |||| || | | ||| || |||| Sbjct 30095 CGCATTTCACCACTCCACCTGAAATTCCCTCTGCCCCTACCGTACTTTAGTTTGGTAGTT 30154 Query 136 TCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTAC 195 || | || | |||||||||| | ||| || | ||||| || ||||| Sbjct 30155 TCCACCGCCTGTCCAGGGTTGAGCCATGGGATTTGACGGCGGACTTAAAAGCCA-CCTAC 30213 Query 196 ACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGC 255 | | ||||||||||||| | || ||||||||| ||| ||| ||||||| ||| || Sbjct 30214 ATACACTTTACACCCAATCATTCTGGATAACGCGTGCATCCTCTGTATTACAGCGAATGT 30273 Query 256 TGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||| ||||| ||| ||||||||| ||| || Sbjct 30274 TGGCATAGAGTTAACCGATGCTTATTCCCCAGATA 30308 >seq10193 Length=60309 Score = 78.8 bits (86), Expect = 2e-12 Identities = 67/83 (81%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 201 CTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCA 260 |||||| |||||| | | |||||||||||||| ||| ||||||| |||||||||||| Sbjct 53809 CTTTACGCCCAATTATTTCGGATAACGCTTGCATCCTCTATATTACCTCGGCTGCTGGCA 53750 Query 261 CGTAGTTAGCCGTGGCTTATTCC 283 | |||||| | ||||||||| Sbjct 53749 CAGAGTTAGTCAATGCTTATTCC 53727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828288841744