Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_031108.1 Length=39640 Score E Sequences producing significant alignments: (Bits) Value seq63545 196 1e-45 >seq63545 Length=90175 Score = 196 bits (216), Expect = 1e-45 Identities = 266/366 (73%), Gaps = 4/366 (1%) Strand=Plus/Minus Query 36426 GCGAAACCCCTATCACCATCGTGGGCAACCTCACCGCCGACCCCGAACTGCGATATAC-C 36484 |||||||| ||||| | ||||||||||||||||| ||||| || ||||| || || | Sbjct 74089 GCGAAACCGTCATCACGGTGGTGGGCAACCTCACCGCGGACCCGGAGCTGCGCTACACGC 74030 Query 36485 AATTCGGGCATTGCCGTCGCCAACTTCACCGTCGCATCCACACCACGCACATTCGACCGG 36544 | ||||| | ||||| || ||||||||| |||| ||||| || ||||| |||||||| Sbjct 74029 AGAACGGGC-TCGCCGTGGCGAACTTCACCATCGCGTCCACCCCTCGCACGTTCGACCGT 73971 Query 36545 CAAGCCAACGAATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCG-GTGTGGCGTCA 36603 || || ||||| |||||||||||||| || |||||||| || ||| | |||||||| | Sbjct 73970 CAGGCGAACGAGTGGAAGGACGGCGACGCGCTGTTCCT-CCGTGCGAGCGTGTGGCGCGA 73912 Query 36604 GCCGGCCGAGAACGTGGCCGAATCGCTGGCCAAGGGCATGCGTGTGATCGTCCAGGGACG 36663 | |||||| ||||||| | || ||| | |||||| || || |||| ||||| || Sbjct 73911 GTTCGCCGAGCACGTGGCGGGCTCACTGACGAAGGGCTCCCGCGTCATCGCGCAGGGTCG 73852 Query 36664 TCTCCGGGCGCGCAGCTACGACGACCGCGACGGAAACCGTCGCACTGTGATCGGGATCGA 36723 ||||| |||| |||| | ||||| || || | | ||||| |||| | |||| Sbjct 73851 CCTCCGTCAGCGCTCCTACCAGGACCGTGAGGGCCAGCAGCGCACGAGCATCGAGCTCGA 73792 Query 36724 AGTCGATGACGTGGGCCCGGCGTTGAAGTTTGCCACCGCTACCGTCACCCGCGCCGCCGC 36783 ||||| || | ||||| || | | || ||||| |||||||| || || | Sbjct 73791 GGTCGACGAGATCGGCCCCTCGCTCCGCTACGCGACCGCGCAGGTCACCCGTGCTGCGGG 73732 Query 36784 TAGTGC 36789 | |||| Sbjct 73731 TGGTGC 73726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126630593574336