Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq63531 145 1e-29 >seq63531 Length=42858 Score = 145 bits (160), Expect = 1e-29 Identities = 226/316 (72%), Gaps = 13/316 (4%) Strand=Plus/Minus Query 196781 TCTTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCGCG 196840 || || |||||||| ||||| || ||||| |||||||||||||| |||||||||||||| Sbjct 32014 TCGTGCCAGCTGTACCAGCGGAGCGCGGACATGTTCCTCGGTGTCCCGTTCAACATCGCC 31955 Query 196841 TCTTACGCATTGCTGATTCACATG---GTGGCGCA-ACAGGTTAACATGGTACCGGGCGA 196896 || ||||| |||||| |||||| | |||||| || || | ||| ||||| Sbjct 31954 TCGTACGCGCTGCTGACCCACATGATCGCGGCGCAGACCGG-GCTCGAGGT---CGGCGA 31899 Query 196897 GTTCGTTTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGA 196956 ||||| ||||| || || ||| |||| ||||| ||| ||| | || ||||| || || Sbjct 31898 CTTCGTGTGGACCGGTGGCGACTGCCACGTCTACGACAACCACGTCGAGCAGGTCGAGGA 31839 Query 196957 ACAGCTGTCTCGTAAACCGAAAGCGTTGCCGACGCTGGTTATCAAACGCAAACCG-GACA 197015 |||||| | || | ||| | ||| | |||||||| | | | |||| ||| ||| Sbjct 31838 GCAGCTGACGCGCACGCCGTACGCGCTCCCGACGCTCG--AGC--TCGCACCCCGCGACT 31783 Query 197016 GTATCTTCGATTACAAATTCGAAGACTTCGAACTGGTAGGCTACGATCCGCATCCGGCGA 197075 ||| ||| ||| | | ||| |||||| | || |||||| | | || ||||||| Sbjct 31782 CGATCGACGACTACGAGTACGAGGACTTCACCGTCGTCGGCTACCACCACCACCCGGCGA 31723 Query 197076 TTAAAGCCCCGGTGGC 197091 | || ||| |||| || Sbjct 31722 TCAAGGCCGCGGTCGC 31707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770928406558080