Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21] 42,990 sequences; 724,284,658 total letters Query= AAMG01001198.1 Length=123 Score E Sequences producing significant alignments: (Bits) Value seq12628 111 9e-23 >seq12628 Length=46081 Score = 111 bits (122), Expect = 9e-23 Identities = 98/121 (81%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 3 GAGGTTTCTTCTCCTAGTTTGGACAAGACCCCACAATCTACAGCGGAAAATGGAGTTTCC 62 ||||||| ||| |||| |||||| |||| |||||| || | || |||||||| ||||| Sbjct 16743 GAGGTTTTTTCACCTAATTTGGAGAAGAACCCACAGACTGCTGCTGAAAATGGTGTTTCT 16802 Query 63 TTATATGGATTTGGGTGCTTCTGTACAAAGTTTGCCGGTGGTAACAGATCCGGTACCGGA 122 ||||||| |||| ||| ||| | ||||||||||||| || | ||||||||||||||| Sbjct 16803 TTATATG-ATTTAAGTGGTTCCGCTCAAAGTTTGCCGGCGGCAGTAGATCCGGTACCGGA 16861 Query 123 G 123 | Sbjct 16862 G 16862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 297480057900