Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21] 42,990 sequences; 724,284,658 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq34285 80.6 2e-13 >seq34285 Length=2838 Score = 80.6 bits (88), Expect = 2e-13 Identities = 86/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 5 TTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTT 64 ||||||||||||||||| | |||||||| || || |||||||||| | ||| ||| Sbjct 2818 TTTTATCCGTTGAGCGACGACCCTTCCACTCGGCACCGTCGGATCACTAAGGCCTATTTT 2759 Query 65 CGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 || |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 2758 CGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 2705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351858133000