Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16] 3,145 sequences; 823,786,402 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq10 347 2e-93 >seq10 Length=65527505 Score = 347 bits (384), Expect = 2e-93 Identities = 242/275 (88%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 1 CGAGTCAATGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGG 60 |||| || ||||||||||||||||| ||||||||||||||||||||||| | ||||||| Sbjct 61842356 CGAGCCAGTGTCCTAGGGCATGTGTGGGGGTGGGTAAAAATGGAAATTTAACTTGTTGGG 61842415 Query 61 GAGAGTCCGACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCT 120 ||| |||||||||||||| |||||||||||||| ||||||||||||||| || |||||| Sbjct 61842416 CAGAATCCGACCCGAATGTGAAAGTCGGAGCATGTGGTGTGGATCTTGGTTATCGGACCT 61842475 Query 121 TGGTTACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACA 180 ||||||||||||||| |||||||| ||||| ||||||||||| || ||| | ||||||| Sbjct 61842476 TGGTTACCGGGTCGGCCTATCAAGGTGCCCCGCATGGGTTCTTTTTCGTAGAAAACAACA 61842535 Query 181 AAAAGGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGAT 240 |||| | || ||||| |||||||| |||||||| ||||||||||||||||||| |||| Sbjct 61842536 AAAAACAAGGACAAAACAGTAAATTAACAAAGATAAATGTTCCTGATGAATTTTCAGGAT 61842595 Query 241 TTGTGCAATCTGGATGCTGTGTGGAGATCTGAAAT 275 |||| ||||| ||||| || ||||||||||||||| Sbjct 61842596 TTGTACAATCCGGATGTTGCGTGGAGATCTGAAAT 61842630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918371116320