Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq20210 107 1e-21 seq23045 100 2e-19 seq26693 98.7 6e-19 seq26536 80.6 1e-13 seq10560 77.0 2e-12 >seq20210 Length=53406 Score = 107 bits (118), Expect = 1e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||| |||||||||| ||||| || |||||| || Sbjct 22271 GAACCCAAAAACTTTGATTTCTTATAAGGTGCCGGTGGAGTCCTAAAAGCAACATCCGCC 22212 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||| ||| |||| |||| |||||| || |||||||||||||||| || Sbjct 22211 GATCCCTGGTCGACATTATTTATGGTTGAGACTAGGATGGTATCTGATCGTCTTTGA 22155 >seq23045 Length=54208 Score = 100 bits (110), Expect = 2e-19 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||| || |||||| |||||||||| ||| | || |||||| | Sbjct 14184 GAACCCAAAAACTCTGTTTTCTCATAAGGTGCCGGCAGAGCCCTAAAAGCAACATCCGTC 14243 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 ||||||| |||| ||| |||| |||| |||||| |||||||||||||||||||| Sbjct 14244 GATCCCTGGTCGACATCATTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTC 14298 >seq26693 Length=159755 Score = 98.7 bits (108), Expect = 6e-19 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||| ||||||||| |||||||| | ||||| || |||||| | Sbjct 159041 GAACCCAAAAACTCTGATTTCTCATAAGGTGCTGGCAGAGTCCTAAAAGCAACATCCGTC 159100 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 ||||||| |||| ||| |||| |||| |||||| |||||||||||||||||| Sbjct 159101 GATCCCTGGTCGACATCATTTATGGTTGAGACTAGAACGGTATCTGATCGTCTT 159154 >seq26536 Length=152591 Score = 80.6 bits (88), Expect = 1e-13 Identities = 88/117 (75%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||| ||||| ||||| ||||||| |||||||| ||||| || ||||| | Sbjct 103349 GAATCCAAAAACTTTAATTTCTCATAAGGTGCTAGTGGAGTCCTAAAAGCAACATTTGTC 103290 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| ||||| | ||||| ||| |||| || || ||||||||||| ||||||| Sbjct 103289 GATCCCTGATCGGCGTCGTTTATGGTAAAGATTAGGATGGTATCTGATCATCTTCGA 103233 >seq10560 Length=10975 Score = 77.0 bits (84), Expect = 2e-12 Identities = 72/92 (78%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 2 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCG 61 |||| ||| ||||||||||||| |||||||| | ||||| || ||||||| | | Sbjct 1476 AACCTAAAAACTTTGATTTCTCATAAGGTGCTGGCGGAGTCCTAAAAGTAACATCCGCTG 1535 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACT 93 |||||| |||| ||| ||||| |||| ||||| Sbjct 1536 ATCCCTGGTCGACATCGTTTATGGTTGAGACT 1567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278311591470