Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq20443 188 1e-45 seq20210 183 6e-44 seq23045 181 2e-43 seq18576 165 1e-38 seq26536 159 6e-37 seq26693 91.5 3e-16 seq24904 89.7 9e-16 seq7042 84.2 4e-14 seq10560 82.4 1e-13 seq6258 78.8 2e-12 seq26464 73.4 7e-11 >seq20443 Length=33350 Score = 188 bits (208), Expect = 1e-45 Identities = 191/245 (78%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| |||| ||||| | ||| |||| ||||| Sbjct 12761 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTATATATATTAACATGGG 12820 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | | | |||| ||||| | |||| || |||||| ||| Sbjct 12821 ATAACATTATAGGATTTTTGTCT-TATTACGTTGGCCTTCAGGATCGAATTAATGAATAA 12879 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 | | |||||||||||| | || || || ||||||||||||||| |||||||||| | Sbjct 12880 TTGAGATAGTCGGGGGCATTCGTCTTTCATAGTCAGAGGTGAAATTTTTGGATTTATGAA 12939 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| | || |||||| || |||||||||||||||||||||| |||| |||||| Sbjct 12940 AGACGAACAAATGGGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACAAAAGTT 12998 Query 314 AGGGG 318 |||| Sbjct 12999 GGGGG 13003 >seq20210 Length=53406 Score = 183 bits (202), Expect = 6e-44 Identities = 196/254 (77%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACAT 124 |||| ||| |||||||||| ||| ||||||| |||||||| ||| ||| | |||||| Sbjct 21903 CCAGCACTGTTACTTTGAAGAAACTAGAGTGCTCAAAGCAATCCTACACTCTGTATACAT 21962 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||| |||| | |||||| | ||| ||||| ||| | || ||| || || Sbjct 21963 TAGCATGGGATAACATTATAGGATTTT-GGTCCTATTACGTTAGCTTTCGGGATCGGAGT 22021 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||| || || |||||| || | |||| || ||||||||| |||||||| | Sbjct 22022 AATGATTAACAGAGACAGTCGGTGGCATTCGTATATCATAGTCAGAGGTAAAATTCTTTG 22081 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||||| |||| ||| ||||| ||||| || |||||||||||||||||||||| || Sbjct 22082 ATTTATGAAAGATGAACAACTGC-AAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGA 22139 Query 305 ACGAAAGTTAGGGG 318 | ||||||| |||| Sbjct 22140 ATGAAAGTTGGGGG 22153 >seq23045 Length=54208 Score = 181 bits (200), Expect = 2e-43 Identities = 181/231 (78%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCA 129 ||| |||||||||| ||||||||||| |||||||| ||| ||||| | ||| ||||||| Sbjct 14631 ACTATTACTTTGAAGAAATTAGAGTGCTCAAAGCAAACCTATGCTCTATATATATTAGCA 14572 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||| |||| | |||||| | ||| ||||| |||| | |||| | ||||||| Sbjct 14571 TGGGATAACATTATAGGATTTT-GGTCCTATTACATTGGCCTTCAGGATTGGAGTAATGA 14513 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||| ||||| ||||||||| | |||||| || ||||||||| |||||||| |||||| Sbjct 14512 TTAACAGGGACAGTCGGGGGCATTAGTATTTCATAGTCAGAGGTAAAATTCTTCGATTTA 14453 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 | |||| ||| ||||| ||||| || |||||||| |||||||||||| Sbjct 14452 TGAAAGATGAACAACTGC-AAAGCATTTGCCAAGGATAATTTCATTAATCA 14403 Score = 107 bits (118), Expect = 4e-21 Identities = 81/94 (86%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284 |||||||||||||||||||||||||| |||| ||| | | ||||||| || |||||| Sbjct 14394 GTCAGAGGTGAAATTCTTGGATTTATGAAAGATGAACAATTTCGAAAGCATTTTCCAAGG 14335 Query 285 ATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||| ||| |||||||||||| Sbjct 14334 ATGTTTTCATTAATCA-AGAATGAAAGTTAGGGG 14302 >seq18576 Length=25438 Score = 165 bits (182), Expect = 1e-38 Identities = 184/242 (76%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCATGGA 133 ||| |||||| ||||||||||| ||||| || |||| || | | |||||||||||||| Sbjct 10863 TTAATTTGAAGAAATTAGAGTGCTCAAACCAAGCCTATGTGTTGTATACATTAGCATGGG 10804 Query 134 ATAATAGAATAGGACGTGCGGTT--CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||| | ||||||| | || ||||| ||| | | ||| || ||||||||| Sbjct 10803 ATAACATTATAGGACTTTTTTTTTCCTATTACATTGTTCTTCGGGATCGGAGTAATGATT 10744 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 || ||||||||| |||||| | ||| | || |||||||||||||||||| ||||||| Sbjct 10743 AACAGGGATAGTTGGGGGTATTCGTAGTTCATAGTCAGAGGTGAAATTCTTAGATTTATG 10684 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||| | ||| |||| |||| | || |||||||| |||| ||||||| ||| ||||| Sbjct 10683 AAAGGCAAACAACTGTGAAACCATTTGCCAAGGATATTTTGTTTAATCA-AGAATGAAAG 10625 Query 312 TT 313 || Sbjct 10624 TT 10623 >seq26536 Length=152591 Score = 159 bits (176), Expect = 6e-37 Identities = 184/244 (75%), Gaps = 3/244 (1%) Strand=Plus/Plus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA-TACATTAGCA 129 ||| ||| |||||| |||||||||||||||||||| ||| || | || ||||||| Sbjct 102985 ACTATTATTTTGAAGAAATTAGAGTGTTCAAAGCAATCCTACTCTTTATGTAAATTAGCA 103044 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||| |||||| |||||| | ||| ||||| ||| | | ||| || ||||| | Sbjct 103045 TGGGATAATATTATAGGATTT-CGGCCCTATTACGTTAGCCTTCGGGATCGAAGTAATTA 103103 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 ||| ||||||||| ||||| | ||||| | ||||||||||||||||||| ||||| Sbjct 103104 TTATCAGGGATAGTTGGGGGCATTCGTATTTCGTAGTCAGAGGTGAAATTCTTGAATTTA 103163 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 | |||| ||| ||| | |||| || |||||||||||||||||||||| || | || Sbjct 103164 TAAAAGATGAACAACTACAAAAGTATTTGCCAAGGATGTTTTCATTAATCA-AGATCAAA 103222 Query 310 AGTT 313 |||| Sbjct 103223 AGTT 103226 >seq26693 Length=159755 Score = 91.5 bits (100), Expect = 3e-16 Identities = 99/129 (77%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACAT 124 |||| ||| |||||||||| ||||||||||| |||||||| |||| |||| | |||||| Sbjct 159483 CCAGCACTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTATATACAT 159424 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||| |||| | |||||| | | | ||||| |||| | | ||| | || Sbjct 159423 TAGCATGGGATAACATTATAGGA-TTTTGATCCTATTACATTGGCCTTTGGGATCTGAGT 159365 Query 185 AATGATTAA 193 ||||||||| Sbjct 159364 AATGATTAA 159356 >seq24904 Length=81429 Score = 89.7 bits (98), Expect = 9e-16 Identities = 71/84 (85%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 235 AAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCAT 294 |||||||||||||||| |||| ||| ||||||||||| || |||||||| ||||||| Sbjct 77898 AAATTCTTGGATTTATGAAAGATGAACAACTGCGAAAGCATTTGCCAAGGATATTTTCAT 77957 Query 295 TAATCAGTGAACGAAAGTTAGGGG 318 |||||| ||| ||||||| |||| Sbjct 77958 TAATCA-AGAATGAAAGTTGGGGG 77980 >seq7042 Length=4503 Score = 84.2 bits (92), Expect = 4e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCAT 130 || |||||||||| |||||||||| |||||||| |||| ||||| |||||||||||| Sbjct 112 CTGTTACTTTGAAGAAATTAGAGTTCTCAAAGCAAGCCTATGCTCTTTATACATTAGCAT 53 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG 168 | |||||| |||||| | |||| ||||| ||||| Sbjct 52 AGGATAATATTATAGGA-TTTCGGTCCTATTACGTTGG 16 >seq10560 Length=10975 Score = 82.4 bits (90), Expect = 1e-13 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||| | Sbjct 4403 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCTT 4344 Query 131 GGAATAATAGAATAGGA 147 || |||||| |||||| Sbjct 4343 GGGATAATATTATAGGA 4327 >seq6258 Length=5630 Score = 78.8 bits (86), Expect = 2e-12 Identities = 57/65 (88%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| ||||| | |||||||||||| Sbjct 2754 CTGTTACTTTGAACAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTGTATACATTAGCAT 2695 Query 131 GGAAT 135 || || Sbjct 2694 GGGAT 2690 >seq26464 Length=192624 Score = 73.4 bits (80), Expect = 7e-11 Identities = 77/100 (77%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| || || |||| ||||||||| ||||||| || || ||| ||| |||| | Sbjct 102866 GTATTTCATGGTTAGAGATGAAATTCTCAGATTTATAAAAAACAAACAACTATGAAACCA 102807 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 || |||||||||||||||||||| | |||| |||||| Sbjct 102806 TTTGCCAAGGATGTTTTCATTAATTA-AGAACAGAAGTTA 102768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914889994304