Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30]
33,873 sequences; 833,080,760 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq20443 188 1e-45
seq20210 183 6e-44
seq23045 181 2e-43
seq18576 165 1e-38
seq26536 159 6e-37
seq26693 91.5 3e-16
seq24904 89.7 9e-16
seq7042 84.2 4e-14
seq10560 82.4 1e-13
seq6258 78.8 2e-12
seq26464 73.4 7e-11
>seq20443
Length=33350
Score = 188 bits (208), Expect = 1e-45
Identities = 191/245 (78%), Gaps = 3/245 (1%)
Strand=Plus/Plus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCATGGA 133
|||||||||| ||||||||||| |||||||| |||| ||||| | ||| |||| |||||
Sbjct 12761 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTATATATATTAACATGGG 12820
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||| | |||||| | | | |||| ||||| | |||| || |||||| |||
Sbjct 12821 ATAACATTATAGGATTTTTGTCT-TATTACGTTGGCCTTCAGGATCGAATTAATGAATAA 12879
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
| | |||||||||||| | || || || ||||||||||||||| |||||||||| |
Sbjct 12880 TTGAGATAGTCGGGGGCATTCGTCTTTCATAGTCAGAGGTGAAATTTTTGGATTTATGAA 12939
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
|||| ||| | || |||||| || |||||||||||||||||||||| |||| ||||||
Sbjct 12940 AGACGAACAAATGGGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACAAAAGTT 12998
Query 314 AGGGG 318
||||
Sbjct 12999 GGGGG 13003
>seq20210
Length=53406
Score = 183 bits (202), Expect = 6e-44
Identities = 196/254 (77%), Gaps = 4/254 (2%)
Strand=Plus/Plus
Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACAT 124
|||| ||| |||||||||| ||| ||||||| |||||||| ||| ||| | ||||||
Sbjct 21903 CCAGCACTGTTACTTTGAAGAAACTAGAGTGCTCAAAGCAATCCTACACTCTGTATACAT 21962
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
|||||||| |||| | |||||| | ||| ||||| ||| | || ||| || ||
Sbjct 21963 TAGCATGGGATAACATTATAGGATTTT-GGTCCTATTACGTTAGCTTTCGGGATCGGAGT 22021
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||| || || |||||| || | |||| || ||||||||| |||||||| |
Sbjct 22022 AATGATTAACAGAGACAGTCGGTGGCATTCGTATATCATAGTCAGAGGTAAAATTCTTTG 22081
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
|||||| |||| ||| ||||| ||||| || |||||||||||||||||||||| ||
Sbjct 22082 ATTTATGAAAGATGAACAACTGC-AAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGA 22139
Query 305 ACGAAAGTTAGGGG 318
| ||||||| ||||
Sbjct 22140 ATGAAAGTTGGGGG 22153
>seq23045
Length=54208
Score = 181 bits (200), Expect = 2e-43
Identities = 181/231 (78%), Gaps = 3/231 (1%)
Strand=Plus/Minus
Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCA 129
||| |||||||||| ||||||||||| |||||||| ||| ||||| | ||| |||||||
Sbjct 14631 ACTATTACTTTGAAGAAATTAGAGTGCTCAAAGCAAACCTATGCTCTATATATATTAGCA 14572
Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189
||| |||| | |||||| | ||| ||||| |||| | |||| | |||||||
Sbjct 14571 TGGGATAACATTATAGGATTTT-GGTCCTATTACATTGGCCTTCAGGATTGGAGTAATGA 14513
Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249
|||| ||||| ||||||||| | |||||| || ||||||||| |||||||| ||||||
Sbjct 14512 TTAACAGGGACAGTCGGGGGCATTAGTATTTCATAGTCAGAGGTAAAATTCTTCGATTTA 14453
Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300
| |||| ||| ||||| ||||| || |||||||| ||||||||||||
Sbjct 14452 TGAAAGATGAACAACTGC-AAAGCATTTGCCAAGGATAATTTCATTAATCA 14403
Score = 107 bits (118), Expect = 4e-21
Identities = 81/94 (86%), Gaps = 1/94 (1%)
Strand=Plus/Minus
Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284
|||||||||||||||||||||||||| |||| ||| | | ||||||| || ||||||
Sbjct 14394 GTCAGAGGTGAAATTCTTGGATTTATGAAAGATGAACAATTTCGAAAGCATTTTCCAAGG 14335
Query 285 ATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|||||||||||||||| ||| ||||||||||||
Sbjct 14334 ATGTTTTCATTAATCA-AGAATGAAAGTTAGGGG 14302
>seq18576
Length=25438
Score = 165 bits (182), Expect = 1e-38
Identities = 184/242 (76%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCATGGA 133
||| |||||| ||||||||||| ||||| || |||| || | | ||||||||||||||
Sbjct 10863 TTAATTTGAAGAAATTAGAGTGCTCAAACCAAGCCTATGTGTTGTATACATTAGCATGGG 10804
Query 134 ATAATAGAATAGGACGTGCGGTT--CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191
|||| | ||||||| | || ||||| ||| | | ||| || |||||||||
Sbjct 10803 ATAACATTATAGGACTTTTTTTTTCCTATTACATTGTTCTTCGGGATCGGAGTAATGATT 10744
Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251
|| ||||||||| |||||| | ||| | || |||||||||||||||||| |||||||
Sbjct 10743 AACAGGGATAGTTGGGGGTATTCGTAGTTCATAGTCAGAGGTGAAATTCTTAGATTTATG 10684
Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311
||| | ||| |||| |||| | || |||||||| |||| ||||||| ||| |||||
Sbjct 10683 AAAGGCAAACAACTGTGAAACCATTTGCCAAGGATATTTTGTTTAATCA-AGAATGAAAG 10625
Query 312 TT 313
||
Sbjct 10624 TT 10623
>seq26536
Length=152591
Score = 159 bits (176), Expect = 6e-37
Identities = 184/244 (75%), Gaps = 3/244 (1%)
Strand=Plus/Plus
Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA-TACATTAGCA 129
||| ||| |||||| |||||||||||||||||||| ||| || | || |||||||
Sbjct 102985 ACTATTATTTTGAAGAAATTAGAGTGTTCAAAGCAATCCTACTCTTTATGTAAATTAGCA 103044
Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189
||| |||||| |||||| | ||| ||||| ||| | | ||| || ||||| |
Sbjct 103045 TGGGATAATATTATAGGATTT-CGGCCCTATTACGTTAGCCTTCGGGATCGAAGTAATTA 103103
Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249
||| ||||||||| ||||| | ||||| | ||||||||||||||||||| |||||
Sbjct 103104 TTATCAGGGATAGTTGGGGGCATTCGTATTTCGTAGTCAGAGGTGAAATTCTTGAATTTA 103163
Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309
| |||| ||| ||| | |||| || |||||||||||||||||||||| || | ||
Sbjct 103164 TAAAAGATGAACAACTACAAAAGTATTTGCCAAGGATGTTTTCATTAATCA-AGATCAAA 103222
Query 310 AGTT 313
||||
Sbjct 103223 AGTT 103226
>seq26693
Length=159755
Score = 91.5 bits (100), Expect = 3e-16
Identities = 99/129 (77%), Gaps = 2/129 (2%)
Strand=Plus/Minus
Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACAT 124
|||| ||| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||
Sbjct 159483 CCAGCACTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTATATACAT 159424
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
|||||||| |||| | |||||| | | | ||||| |||| | | ||| | ||
Sbjct 159423 TAGCATGGGATAACATTATAGGA-TTTTGATCCTATTACATTGGCCTTTGGGATCTGAGT 159365
Query 185 AATGATTAA 193
|||||||||
Sbjct 159364 AATGATTAA 159356
>seq24904
Length=81429
Score = 89.7 bits (98), Expect = 9e-16
Identities = 71/84 (85%), Gaps = 1/84 (1%)
Strand=Plus/Plus
Query 235 AAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCAT 294
|||||||||||||||| |||| ||| ||||||||||| || |||||||| |||||||
Sbjct 77898 AAATTCTTGGATTTATGAAAGATGAACAACTGCGAAAGCATTTGCCAAGGATATTTTCAT 77957
Query 295 TAATCAGTGAACGAAAGTTAGGGG 318
|||||| ||| ||||||| ||||
Sbjct 77958 TAATCA-AGAATGAAAGTTGGGGG 77980
>seq7042
Length=4503
Score = 84.2 bits (92), Expect = 4e-14
Identities = 79/98 (81%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCAT 130
|| |||||||||| |||||||||| |||||||| |||| ||||| ||||||||||||
Sbjct 112 CTGTTACTTTGAAGAAATTAGAGTTCTCAAAGCAAGCCTATGCTCTTTATACATTAGCAT 53
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG 168
| |||||| |||||| | |||| ||||| |||||
Sbjct 52 AGGATAATATTATAGGA-TTTCGGTCCTATTACGTTGG 16
>seq10560
Length=10975
Score = 82.4 bits (90), Expect = 1e-13
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||| |
Sbjct 4403 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCTT 4344
Query 131 GGAATAATAGAATAGGA 147
|| |||||| ||||||
Sbjct 4343 GGGATAATATTATAGGA 4327
>seq6258
Length=5630
Score = 78.8 bits (86), Expect = 2e-12
Identities = 57/65 (88%), Gaps = 1/65 (2%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| ||||| | ||||||||||||
Sbjct 2754 CTGTTACTTTGAACAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTGTATACATTAGCAT 2695
Query 131 GGAAT 135
|| ||
Sbjct 2694 GGGAT 2690
>seq26464
Length=192624
Score = 73.4 bits (80), Expect = 7e-11
Identities = 77/100 (77%), Gaps = 1/100 (1%)
Strand=Plus/Minus
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| || || |||| ||||||||| ||||||| || || ||| ||| |||| |
Sbjct 102866 GTATTTCATGGTTAGAGATGAAATTCTCAGATTTATAAAAAACAAACAACTATGAAACCA 102807
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314
|| |||||||||||||||||||| | |||| ||||||
Sbjct 102806 TTTGCCAAGGATGTTTTCATTAATTA-AGAACAGAAGTTA 102768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914889994304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |