Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30]
33,873 sequences; 833,080,760 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq22933 129 8e-28
seq13847 129 8e-28
seq21360 104 3e-20
seq14300 98.7 1e-18
seq13222 96.9 5e-18
seq26299 95.1 2e-17
seq25514 95.1 2e-17
seq23543 93.3 6e-17
seq22104 89.7 7e-16
seq32157 86.0 9e-15
seq26970 86.0 9e-15
seq25400 80.6 4e-13
seq25104 75.2 2e-11
>seq22933
Length=72701
Score = 129 bits (142), Expect = 8e-28
Identities = 176/243 (72%), Gaps = 12/243 (5%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||| ||| ||||| | |||||||| ||||| ||| ||| | ||
Sbjct 39552 CCTTCCAGCACCGGGAAGGTGTCAGACTCTATACATCATGTTACCA-CTTAGCAGAGTCC 39610
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
|||||||||| |||||||||||| ||| ||| | | ||| | | | | || |
Sbjct 39611 TGTGTTTTTAATAAACAGTCGCTACCCCCTAGTATGTGCCGCTTTCCTAA--TAAAAAGA 39668
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | |||||||||||| ||||||||||| ||||||||||| |||||
Sbjct 39669 T--------AGGAGAGA-ACCCCTTCTCCCAAAGTTACGGGGTCATTTTGCCGAGTTCCT 39719
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
| || |||| | | | ||| |||||| |||||| || ||||||||||||||| |
Sbjct 39720 TCGACAAGGTTCTCTCAAGTGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 39779
Query 246 GTA 248
|||
Sbjct 39780 GTA 39782
>seq13847
Length=12906
Score = 129 bits (142), Expect = 8e-28
Identities = 176/243 (72%), Gaps = 12/243 (5%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||||||| ||||| | |||||||| ||||| ||| ||| | ||
Sbjct 6945 CCTTCCAACACCGGGCAGGTGTCAGACTCTATACATCATGTTACCA-CTTAGCAGAGTCC 7003
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
| |||||||| |||||||||||| ||| || | | ||| | | | |||| |
Sbjct 7004 TATGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 7061
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | ||||||||||| ||||||||||||| ||||||||||| |||||
Sbjct 7062 T--------AGGAGAG-CACCCCTTCTCTCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 7112
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
| || |||| | | | |||| |||||| |||||| || |||||| || ||||| |
Sbjct 7113 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGAGTTGGTTTGGG 7172
Query 246 GTA 248
|||
Sbjct 7173 GTA 7175
>seq21360
Length=40010
Score = 104 bits (114), Expect = 3e-20
Identities = 168/242 (69%), Gaps = 20/242 (8%)
Strand=Plus/Minus
Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66
|||||| || ||||||| ||||| || |||||| | ||||| | || || |||||
Sbjct 39870 CTTCCAGTACTGGGCAGGTGTCAGCCCCCATACATGGTCTTACGATTTT-GCGAAGACCT 39812
Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGT 126
|||||||| |||||||||||| || || |||||||| || |
Sbjct 39811 GTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT-------------T 39765
Query 127 CGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTT 186
|| || || ||||||||||||||| ||||| ||||| ||||||| || || |||
Sbjct 39764 TGTG----AGGAG--GCACCCCTTCTCCCGGAGTTATGGGGCTATTTTGCTGAGTTACTT 39711
Query 187 AACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGG 246
| | |||| | || | ||| ||||||||||||| |||||| ||| ||||| ||
Sbjct 39710 AGAGAGAGTTGTCTCGTGCCCCTAGGTATTCTCTACCTACCCACCTATGTTGGTTTCAGG 39651
Query 247 TA 248
||
Sbjct 39650 TA 39649
>seq14300
Length=13841
Score = 98.7 bits (108), Expect = 1e-18
Identities = 88/109 (81%), Gaps = 1/109 (1%)
Strand=Plus/Minus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCC-TTAACCACAGTTCAC 199
||||||||||||| |||||||||||||| |||||||||| |||| ||| | ||| |
Sbjct 8884 GGCACCCCTTCTCTCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTTAGAGAGAGTCGTC 8825
Query 200 CCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|| || ||| ||||||||||| | ||||||||| ||||||| ||||
Sbjct 8824 TCGCACCCCTAGGTATTCTCTACTTACCCACCTGTGACGGTTTAGGGTA 8776
>seq13222
Length=11826
Score = 96.9 bits (106), Expect = 5e-18
Identities = 86/108 (80%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||||||||||||||||| |||||||||| |||| || | |||| |
Sbjct 4309 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCATAGAGAGAGTTGTCT 4368
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|| ||| ||||||||||||| | ||||||||| |||| ||||
Sbjct 4369 CGCGTCCCTAGGTATTCTCTACCTACCTACCTGTGTCAGTTTCGGGTA 4416
Score = 77.0 bits (84), Expect = 5e-12
Identities = 67/82 (82%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | |||| || ||| || ||||
Sbjct 4107 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTA-CGACTTTGCGGAGACC 4165
Query 66 TGTGTTTTTAGTAAACAGTCGC 87
||||||||| ||||||||||||
Sbjct 4166 TGTGTTTTTGGTAAACAGTCGC 4187
>seq26299
Length=121941
Score = 95.1 bits (104), Expect = 2e-17
Identities = 131/181 (72%), Gaps = 12/181 (7%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||| | ||||||||||| ||||| | |||| |||| ||||| ||| ||| | ||
Sbjct 108197 CCTTCTAGCACCGGGCAGGTGTCAGACTCTATATATCGTGTTACCA-CTTAGCAGAGTCC 108139
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
|||||||||| |||||||||||| || | | | || | | || |||| |
Sbjct 108138 TGTGTTTTTAATAAACAGTCGCTACC--CCGTGGTATGTGTCGCTTTCCTAATCAAAAGA 108081
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || |||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 108080 T--------AGGAG-AGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 108030
Query 186 T 186
|
Sbjct 108029 T 108029
>seq25514
Length=112632
Score = 95.1 bits (104), Expect = 2e-17
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201
|||||||||||||| ||||||||||| ||||||||| | |||||| ||| |||| | |
Sbjct 78578 GCACCCCTTCTCCCAAAGTTACGGGGTCATTTTGCCAAGTTCCTTCGACACGGTTCTCTC 78519
Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
| ||| || ||| |||||| || ||| ||||||||||| ||||
Sbjct 78518 AAGTGCCCTATTATACTCTACTTGTTCACTTGTGTCGGTTTGGGGTA 78472
>seq23543
Length=59522
Score = 93.3 bits (102), Expect = 6e-17
Identities = 167/243 (69%), Gaps = 21/243 (9%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||| ||| ||| |||||||| || |||||| | ||||| | ||| || ||||
Sbjct 2552 CCTTCTGGCACTGGGTAGGCGTCAACCCC-ATACATAGTCTTAC-GACTTTGCGGAGACC 2495
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
|||||| |||||||| ||| || || || |||||||| | |
Sbjct 2494 TGTGTTCTTAGTAAATAGTTGCCCGGGCCTGGTCACTGCGACC-------------CTCT 2448
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || |||||||||||||| |||||| | | | ||||||| || |||||
Sbjct 2447 TTGTG----AGGAG--GCACCCCTTCTCCCAAAGTTATGAGTCTATTTTGCTGAGTTCCT 2394
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || || ||| ||||||||||||| || |||||||| ||||| |
Sbjct 2393 TAGAGAAAGTTGTCTCGCACCCCTAGGTATTCTCTACCTAACGACCTGTGTTGGTTTCGG 2334
Query 246 GTA 248
|||
Sbjct 2333 GTA 2331
>seq22104
Length=86942
Score = 89.7 bits (98), Expect = 7e-16
Identities = 88/110 (80%), Gaps = 4/110 (4%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||| ||||||||||| |||||||| | ||||||| | |||| |
Sbjct 9803 GGCACCCCTTCTCCTAAAGTTACGGGGTTATTTTGCCAAGTTCCTTAGAGAGAGTTGTCT 9862
Query 201 CGAACGCCT-TA-GTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
| |||||| || ||||||||||||| |||||||||||| ||| ||||
Sbjct 9863 C--ACGCCTCTAGGTATTCTCTACCTACCCACCTGTGTCGATTTCGGGTA 9910
>seq32157
Length=4295
Score = 86.0 bits (94), Expect = 9e-15
Identities = 83/103 (81%), Gaps = 4/103 (4%)
Strand=Plus/Plus
Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTT-CA-C 199
||||||||||||||||| ||| |||| |||||||||| ||||||| | |||| || |
Sbjct 3373 GCACCCCTTCTCCCGAAATTATGGGGATATTTTGCCGAGTTCCTTAGAGAGAGTTGCATC 3432
Query 200 CCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242
|| | ||| ||||||||||||| |||||| |||||||||
Sbjct 3433 ACG--CCCCTAGGTATTCTCTACCTACCCACCTATGTCGGTTT 3473
>seq26970
Length=265397
Score = 86.0 bits (94), Expect = 9e-15
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
||||||||||||| |||||||| ||||| |||||||| | ||||||| | |||| |
Sbjct 125798 GGCACCCCTTCTCTCGAAGTTATGGGGCTATTTTGCCTAGTTCCTTAGAGAGAGTTGTCT 125857
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242
|| | ||| ||||||||||||| ||| |||||| ||||
Sbjct 125858 CGCGCCCCTAGGTATTCTCTACCTACCCATTTGTGTCAGTTT 125899
>seq25400
Length=88376
Score = 80.6 bits (88), Expect = 4e-13
Identities = 84/109 (77%), Gaps = 1/109 (1%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAA-CCACAGTTCAC 199
||||||||||||| ||||||||| ||| |||||||| | |||||||| | | | |
Sbjct 77651 GGCACCCCTTCTCTCGAAGTTACAGGGTTATTTTGCCAAGTTCCTTAAGAGAAAACTATC 77710
Query 200 CCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|| || ||| ||||||| ||||| |||||| ||||||||| ||||
Sbjct 77711 TCGCACCCCTGGGTATTCTTTACCTACCCACCTATGTCGGTTTCGGGTA 77759
>seq25104
Length=81970
Score = 75.2 bits (82), Expect = 2e-11
Identities = 82/104 (79%), Gaps = 4/104 (4%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||| |||||| |||||||| |||| |||||| ||| || |||| | |||| |
Sbjct 7183 GGCACCTCTTCTCTCGAAGTTATGGGGTTATTTTGTCGAGTTTCTTAGAGAGAGTTATCT 7242
Query 201 CGAACGCCTTAG-TATTCTCTACCTGACC-ACCTGTGTCGGTTT 242
|| | |||||| ||||||||| || ||| ||||||||||||||
Sbjct 7243 CGCGC-CCTTAGGTATTCTCTA-CTAACCTACCTGTGTCGGTTT 7284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694172136329
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |