Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq22933 129 8e-28 seq13847 129 8e-28 seq21360 104 3e-20 seq14300 98.7 1e-18 seq13222 96.9 5e-18 seq26299 95.1 2e-17 seq25514 95.1 2e-17 seq23543 93.3 6e-17 seq22104 89.7 7e-16 seq32157 86.0 9e-15 seq26970 86.0 9e-15 seq25400 80.6 4e-13 seq25104 75.2 2e-11 >seq22933 Length=72701 Score = 129 bits (142), Expect = 8e-28 Identities = 176/243 (72%), Gaps = 12/243 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||| ||| ||||| | |||||||| ||||| ||| ||| | || Sbjct 39552 CCTTCCAGCACCGGGAAGGTGTCAGACTCTATACATCATGTTACCA-CTTAGCAGAGTCC 39610 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| ||| | | ||| | | | | || | Sbjct 39611 TGTGTTTTTAATAAACAGTCGCTACCCCCTAGTATGTGCCGCTTTCCTAA--TAAAAAGA 39668 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | |||||||||||| ||||||||||| ||||||||||| ||||| Sbjct 39669 T--------AGGAGAGA-ACCCCTTCTCCCAAAGTTACGGGGTCATTTTGCCGAGTTCCT 39719 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | ||| |||||| |||||| || ||||||||||||||| | Sbjct 39720 TCGACAAGGTTCTCTCAAGTGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 39779 Query 246 GTA 248 ||| Sbjct 39780 GTA 39782 >seq13847 Length=12906 Score = 129 bits (142), Expect = 8e-28 Identities = 176/243 (72%), Gaps = 12/243 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | |||||||| ||||| ||| ||| | || Sbjct 6945 CCTTCCAACACCGGGCAGGTGTCAGACTCTATACATCATGTTACCA-CTTAGCAGAGTCC 7003 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 | |||||||| |||||||||||| ||| || | | ||| | | | |||| | Sbjct 7004 TATGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 7061 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||| ||||||||||||| ||||||||||| ||||| Sbjct 7062 T--------AGGAGAG-CACCCCTTCTCTCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 7112 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | |||| |||||| |||||| || |||||| || ||||| | Sbjct 7113 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGAGTTGGTTTGGG 7172 Query 246 GTA 248 ||| Sbjct 7173 GTA 7175 >seq21360 Length=40010 Score = 104 bits (114), Expect = 3e-20 Identities = 168/242 (69%), Gaps = 20/242 (8%) Strand=Plus/Minus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 |||||| || ||||||| ||||| || |||||| | ||||| | || || ||||| Sbjct 39870 CTTCCAGTACTGGGCAGGTGTCAGCCCCCATACATGGTCTTACGATTTT-GCGAAGACCT 39812 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGT 126 |||||||| |||||||||||| || || |||||||| || | Sbjct 39811 GTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT-------------T 39765 Query 127 CGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTT 186 || || || ||||||||||||||| ||||| ||||| ||||||| || || ||| Sbjct 39764 TGTG----AGGAG--GCACCCCTTCTCCCGGAGTTATGGGGCTATTTTGCTGAGTTACTT 39711 Query 187 AACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGG 246 | | |||| | || | ||| ||||||||||||| |||||| ||| ||||| || Sbjct 39710 AGAGAGAGTTGTCTCGTGCCCCTAGGTATTCTCTACCTACCCACCTATGTTGGTTTCAGG 39651 Query 247 TA 248 || Sbjct 39650 TA 39649 >seq14300 Length=13841 Score = 98.7 bits (108), Expect = 1e-18 Identities = 88/109 (81%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCC-TTAACCACAGTTCAC 199 ||||||||||||| |||||||||||||| |||||||||| |||| ||| | ||| | Sbjct 8884 GGCACCCCTTCTCTCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTTAGAGAGAGTCGTC 8825 Query 200 CCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || || ||| ||||||||||| | ||||||||| ||||||| |||| Sbjct 8824 TCGCACCCCTAGGTATTCTCTACTTACCCACCTGTGACGGTTTAGGGTA 8776 >seq13222 Length=11826 Score = 96.9 bits (106), Expect = 5e-18 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||||||||||||||||| |||||||||| |||| || | |||| | Sbjct 4309 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCATAGAGAGAGTTGTCT 4368 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || ||| ||||||||||||| | ||||||||| |||| |||| Sbjct 4369 CGCGTCCCTAGGTATTCTCTACCTACCTACCTGTGTCAGTTTCGGGTA 4416 Score = 77.0 bits (84), Expect = 5e-12 Identities = 67/82 (82%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | |||| || ||| || |||| Sbjct 4107 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTA-CGACTTTGCGGAGACC 4165 Query 66 TGTGTTTTTAGTAAACAGTCGC 87 ||||||||| |||||||||||| Sbjct 4166 TGTGTTTTTGGTAAACAGTCGC 4187 >seq26299 Length=121941 Score = 95.1 bits (104), Expect = 2e-17 Identities = 131/181 (72%), Gaps = 12/181 (7%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||| | ||||||||||| ||||| | |||| |||| ||||| ||| ||| | || Sbjct 108197 CCTTCTAGCACCGGGCAGGTGTCAGACTCTATATATCGTGTTACCA-CTTAGCAGAGTCC 108139 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| || | | | || | | || |||| | Sbjct 108138 TGTGTTTTTAATAAACAGTCGCTACC--CCGTGGTATGTGTCGCTTTCCTAATCAAAAGA 108081 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || |||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 108080 T--------AGGAG-AGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 108030 Query 186 T 186 | Sbjct 108029 T 108029 >seq25514 Length=112632 Score = 95.1 bits (104), Expect = 2e-17 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201 |||||||||||||| ||||||||||| ||||||||| | |||||| ||| |||| | | Sbjct 78578 GCACCCCTTCTCCCAAAGTTACGGGGTCATTTTGCCAAGTTCCTTCGACACGGTTCTCTC 78519 Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | ||| || ||| |||||| || ||| ||||||||||| |||| Sbjct 78518 AAGTGCCCTATTATACTCTACTTGTTCACTTGTGTCGGTTTGGGGTA 78472 >seq23543 Length=59522 Score = 93.3 bits (102), Expect = 6e-17 Identities = 167/243 (69%), Gaps = 21/243 (9%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||| ||| ||| |||||||| || |||||| | ||||| | ||| || |||| Sbjct 2552 CCTTCTGGCACTGGGTAGGCGTCAACCCC-ATACATAGTCTTAC-GACTTTGCGGAGACC 2495 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||| |||||||| ||| || || || |||||||| | | Sbjct 2494 TGTGTTCTTAGTAAATAGTTGCCCGGGCCTGGTCACTGCGACC-------------CTCT 2448 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || |||||||||||||| |||||| | | | ||||||| || ||||| Sbjct 2447 TTGTG----AGGAG--GCACCCCTTCTCCCAAAGTTATGAGTCTATTTTGCTGAGTTCCT 2394 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || || ||| ||||||||||||| || |||||||| ||||| | Sbjct 2393 TAGAGAAAGTTGTCTCGCACCCCTAGGTATTCTCTACCTAACGACCTGTGTTGGTTTCGG 2334 Query 246 GTA 248 ||| Sbjct 2333 GTA 2331 >seq22104 Length=86942 Score = 89.7 bits (98), Expect = 7e-16 Identities = 88/110 (80%), Gaps = 4/110 (4%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||| ||||||||||| |||||||| | ||||||| | |||| | Sbjct 9803 GGCACCCCTTCTCCTAAAGTTACGGGGTTATTTTGCCAAGTTCCTTAGAGAGAGTTGTCT 9862 Query 201 CGAACGCCT-TA-GTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | |||||| || ||||||||||||| |||||||||||| ||| |||| Sbjct 9863 C--ACGCCTCTAGGTATTCTCTACCTACCCACCTGTGTCGATTTCGGGTA 9910 >seq32157 Length=4295 Score = 86.0 bits (94), Expect = 9e-15 Identities = 83/103 (81%), Gaps = 4/103 (4%) Strand=Plus/Plus Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTT-CA-C 199 ||||||||||||||||| ||| |||| |||||||||| ||||||| | |||| || | Sbjct 3373 GCACCCCTTCTCCCGAAATTATGGGGATATTTTGCCGAGTTCCTTAGAGAGAGTTGCATC 3432 Query 200 CCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 || | ||| ||||||||||||| |||||| ||||||||| Sbjct 3433 ACG--CCCCTAGGTATTCTCTACCTACCCACCTATGTCGGTTT 3473 >seq26970 Length=265397 Score = 86.0 bits (94), Expect = 9e-15 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 ||||||||||||| |||||||| ||||| |||||||| | ||||||| | |||| | Sbjct 125798 GGCACCCCTTCTCTCGAAGTTATGGGGCTATTTTGCCTAGTTCCTTAGAGAGAGTTGTCT 125857 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 || | ||| ||||||||||||| ||| |||||| |||| Sbjct 125858 CGCGCCCCTAGGTATTCTCTACCTACCCATTTGTGTCAGTTT 125899 >seq25400 Length=88376 Score = 80.6 bits (88), Expect = 4e-13 Identities = 84/109 (77%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAA-CCACAGTTCAC 199 ||||||||||||| ||||||||| ||| |||||||| | |||||||| | | | | Sbjct 77651 GGCACCCCTTCTCTCGAAGTTACAGGGTTATTTTGCCAAGTTCCTTAAGAGAAAACTATC 77710 Query 200 CCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || || ||| ||||||| ||||| |||||| ||||||||| |||| Sbjct 77711 TCGCACCCCTGGGTATTCTTTACCTACCCACCTATGTCGGTTTCGGGTA 77759 >seq25104 Length=81970 Score = 75.2 bits (82), Expect = 2e-11 Identities = 82/104 (79%), Gaps = 4/104 (4%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||| |||||| |||||||| |||| |||||| ||| || |||| | |||| | Sbjct 7183 GGCACCTCTTCTCTCGAAGTTATGGGGTTATTTTGTCGAGTTTCTTAGAGAGAGTTATCT 7242 Query 201 CGAACGCCTTAG-TATTCTCTACCTGACC-ACCTGTGTCGGTTT 242 || | |||||| ||||||||| || ||| |||||||||||||| Sbjct 7243 CGCGC-CCTTAGGTATTCTCTA-CTAACCTACCTGTGTCGGTTT 7284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694172136329