Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq14491 82.4 8e-14 seq13222 82.4 8e-14 seq22104 80.6 3e-13 seq26970 75.2 1e-11 seq21360 75.2 1e-11 >seq14491 Length=14244 Score = 82.4 bits (90), Expect = 8e-14 Identities = 86/111 (77%), Gaps = 3/111 (3%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 6294 TAAGGAACTTGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 6237 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAAC-AAAAACACAGGGCT 189 | || ||||| || ||| || ||| || ||||| | ||||||||||| || Sbjct 6236 GGGGTCGCAGTGACCAGGCCCGGGCGACAGTTTACCAAAAAACACAGGTCT 6186 >seq13222 Length=11826 Score = 82.4 bits (90), Expect = 8e-14 Identities = 89/117 (76%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 || |||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| || Sbjct 4355 TATGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAAGG 4296 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||||| || ||| | || |||||||| |||||||||||| || ||| || Sbjct 4295 --GGTCGCAGTGACCAGGCCTGGGTGACTGTTTACCAAAAACACAGGTCTTTGCAAA 4241 >seq22104 Length=86942 Score = 80.6 bits (88), Expect = 3e-13 Identities = 85/113 (75%), Gaps = 7/113 (6%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | |||| ||||||| ||| || |||| ||| | | ||| | Sbjct 9849 TAAGGAACTTGGCAAAATAACCCCGTAACTTTAGGAGAAGGGGTGCCTCCTTACAAAAAG 9790 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTG 192 ||||| ||| ||||||||||||||||| ||||||||||| || || Sbjct 9789 GAGGGACCAG-------GTCCAGGCAACTGTTTACAAAAAACACAGGTCTTTG 9744 >seq26970 Length=265397 Score = 75.2 bits (82), Expect = 1e-11 Identities = 83/110 (75%), Gaps = 3/110 (3%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 |||||||||||||||| | ||| |||||||| || || |||| ||| | || ||| Sbjct 125844 TAAGGAACTAGGCAAAATAGCCCCATAACTTCGAGAGAAGGGGTGCCTCCTCACAAA--- 125788 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || | | | || | | ||||||| ||||||| |||||||||||| || Sbjct 125787 GGGGTCCCGGTGACCAAGCCCAGGCATCTGTTTACCAAAAACACAGGTCT 125738 >seq21360 Length=40010 Score = 75.2 bits (82), Expect = 1e-11 Identities = 83/110 (75%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 |||| |||| ||||| | ||| ||||| ||||| || |||| ||| | || ||| || Sbjct 39710 TAAGTAACTCAGCAAAATAGCCCCATAACTCCGGGAGAAGGGGTGCCTCCTCACAAAGGG 39769 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | | ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 39770 G--GTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 39817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531025689542