Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30]
33,873 sequences; 833,080,760 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq14491 82.4 8e-14
seq13222 82.4 8e-14
seq22104 80.6 3e-13
seq26970 75.2 1e-11
seq21360 75.2 1e-11
>seq14491
Length=14244
Score = 82.4 bits (90), Expect = 8e-14
Identities = 86/111 (77%), Gaps = 3/111 (3%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 6294 TAAGGAACTTGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 6237
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAAC-AAAAACACAGGGCT 189
| || ||||| || ||| || ||| || ||||| | ||||||||||| ||
Sbjct 6236 GGGGTCGCAGTGACCAGGCCCGGGCGACAGTTTACCAAAAAACACAGGTCT 6186
>seq13222
Length=11826
Score = 82.4 bits (90), Expect = 8e-14
Identities = 89/117 (76%), Gaps = 2/117 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
|| |||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| ||
Sbjct 4355 TATGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAAGG 4296
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| ||||| || ||| | || |||||||| |||||||||||| || ||| ||
Sbjct 4295 --GGTCGCAGTGACCAGGCCTGGGTGACTGTTTACCAAAAACACAGGTCTTTGCAAA 4241
>seq22104
Length=86942
Score = 80.6 bits (88), Expect = 3e-13
Identities = 85/113 (75%), Gaps = 7/113 (6%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | |||| ||||||| ||| || |||| ||| | | ||| |
Sbjct 9849 TAAGGAACTTGGCAAAATAACCCCGTAACTTTAGGAGAAGGGGTGCCTCCTTACAAAAAG 9790
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTG 192
||||| ||| ||||||||||||||||| ||||||||||| || ||
Sbjct 9789 GAGGGACCAG-------GTCCAGGCAACTGTTTACAAAAAACACAGGTCTTTG 9744
>seq26970
Length=265397
Score = 75.2 bits (82), Expect = 1e-11
Identities = 83/110 (75%), Gaps = 3/110 (3%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
|||||||||||||||| | ||| |||||||| || || |||| ||| | || |||
Sbjct 125844 TAAGGAACTAGGCAAAATAGCCCCATAACTTCGAGAGAAGGGGTGCCTCCTCACAAA--- 125788
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || | | | || | | ||||||| ||||||| |||||||||||| ||
Sbjct 125787 GGGGTCCCGGTGACCAAGCCCAGGCATCTGTTTACCAAAAACACAGGTCT 125738
>seq21360
Length=40010
Score = 75.2 bits (82), Expect = 1e-11
Identities = 83/110 (75%), Gaps = 2/110 (2%)
Strand=Plus/Plus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
|||| |||| ||||| | ||| ||||| ||||| || |||| ||| | || ||| ||
Sbjct 39710 TAAGTAACTCAGCAAAATAGCCCCATAACTCCGGGAGAAGGGGTGCCTCCTCACAAAGGG 39769
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| | ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 39770 G--GTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 39817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531025689542
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |