Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30]
33,873 sequences; 833,080,760 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq13222 87.8 2e-15
seq22933 82.4 7e-14
seq13847 82.4 7e-14
seq26299 77.0 3e-12
seq23113 77.0 3e-12
seq22664 75.2 1e-11
>seq13222
Length=11826
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 4208 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 4149
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 4148 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 4103
>seq22933
Length=72701
Score = 82.4 bits (90), Expect = 7e-14
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||| ||| | ||||||||||||||||||||||| ||||||| || | || ||
Sbjct 39645 ATACTAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACATGAT 39586
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || |||| ||| |||||||| |||||||
Sbjct 39585 GTATAGAGTCTGACACCTTCCCGGTGCTGGAAGGT 39551
>seq13847
Length=12906
Score = 82.4 bits (90), Expect = 7e-14
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | |||||||||||||||||||| || ||||||| || | || ||
Sbjct 7038 ATACCAGGGGGTAGCGACTGTTTATTAAAAACATAGGACTCTGCTAAGTGGTAACATGAT 6979
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || |||| ||||||||||| |||||||
Sbjct 6978 GTATAGAGTCTGACACCTGCCCGGTGTTGGAAGGT 6944
>seq26299
Length=121941
Score = 77.0 bits (84), Expect = 3e-12
Identities = 74/95 (78%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||| | | ||||||||||||||||||||||| ||||||| || | || ||
Sbjct 108104 ATACCACGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 108163
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
||||| || |||| |||||||||||| ||||||
Sbjct 108164 ATATAGAGTCTGACACCTGCCCGGTGCTAGAAGGT 108198
>seq23113
Length=55029
Score = 77.0 bits (84), Expect = 3e-12
Identities = 68/85 (80%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127
||||||||||| ||||||||| ||||||||| || ||| || ||| ||| |||
Sbjct 9531 GCGACTGTTTACCAAAAACACAAGTCTCTGCAAAGTCGTAAGACCACATATGGGGGCTGA 9472
Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152
||||||||| |||||||||||| ||
Sbjct 9471 CGCCTGCCCAGTGCCGGAAGGTCAA 9447
>seq22664
Length=50802
Score = 75.2 bits (82), Expect = 1e-11
Identities = 80/106 (75%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| ||||| |||| ||||||||| |
Sbjct 15872 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAATACAGGGCTCTGCAAAGTCAT 15931
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | ||| ||| ||||||||| || |||||||||||| ||
Sbjct 15932 AAGACCATATATGGGGGCTGACGCCTGTCCAGTGCCGGAAGGTCAA 15977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476643540613
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |