Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq13222 87.8 2e-15 seq22933 82.4 7e-14 seq13847 82.4 7e-14 seq26299 77.0 3e-12 seq23113 77.0 3e-12 seq22664 75.2 1e-11 >seq13222 Length=11826 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 4208 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 4149 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 4148 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 4103 >seq22933 Length=72701 Score = 82.4 bits (90), Expect = 7e-14 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||| ||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 39645 ATACTAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACATGAT 39586 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| ||| |||||||| ||||||| Sbjct 39585 GTATAGAGTCTGACACCTTCCCGGTGCTGGAAGGT 39551 >seq13847 Length=12906 Score = 82.4 bits (90), Expect = 7e-14 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | |||||||||||||||||||| || ||||||| || | || || Sbjct 7038 ATACCAGGGGGTAGCGACTGTTTATTAAAAACATAGGACTCTGCTAAGTGGTAACATGAT 6979 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| ||||||||||| ||||||| Sbjct 6978 GTATAGAGTCTGACACCTGCCCGGTGTTGGAAGGT 6944 >seq26299 Length=121941 Score = 77.0 bits (84), Expect = 3e-12 Identities = 74/95 (78%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||| | | ||||||||||||||||||||||| ||||||| || | || || Sbjct 108104 ATACCACGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 108163 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 ||||| || |||| |||||||||||| |||||| Sbjct 108164 ATATAGAGTCTGACACCTGCCCGGTGCTAGAAGGT 108198 >seq23113 Length=55029 Score = 77.0 bits (84), Expect = 3e-12 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||| ||||||||| || ||| || ||| ||| ||| Sbjct 9531 GCGACTGTTTACCAAAAACACAAGTCTCTGCAAAGTCGTAAGACCACATATGGGGGCTGA 9472 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||| |||||||||||| || Sbjct 9471 CGCCTGCCCAGTGCCGGAAGGTCAA 9447 >seq22664 Length=50802 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/106 (75%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| ||||| |||| ||||||||| | Sbjct 15872 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAATACAGGGCTCTGCAAAGTCAT 15931 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | ||| ||| ||||||||| || |||||||||||| || Sbjct 15932 AAGACCATATATGGGGGCTGACGCCTGTCCAGTGCCGGAAGGTCAA 15977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476643540613