Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq15977 282 7e-74 seq6258 268 1e-69 seq23045 246 5e-63 seq20210 237 3e-60 seq10560 235 9e-60 seq18576 223 6e-56 seq26693 219 7e-55 seq24839 197 2e-48 seq26536 185 1e-44 seq14993 183 5e-44 seq23165 154 2e-35 seq26345 98.7 2e-18 seq13315 91.5 2e-16 seq19565 86.0 1e-14 seq25675 73.4 6e-11 >seq15977 Length=29732 Score = 282 bits (312), Expect = 7e-74 Identities = 211/245 (86%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 7477 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTATTATTACCTC 7418 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-ATAG-T 133 |||||||| | || ||| | ||||||||||||||||| ||| | || ||| | Sbjct 7417 AAACTTCCGCGGCCTAAAAGGCCGTAGTCCCTCTAAGAAGCTGGCCGCGAAGGGATACCT 7358 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 || |||| |||||||| | ||||||||||||||| |||||||||| ||||||||| Sbjct 7357 CGGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACAAGACAAATCG 7298 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | Sbjct 7297 CTCCACCAACTAAGAACGGCCATGCACTACCACCCATAGAATCAAGAAAGAGCTCTCAGT 7238 Query 254 CTGTC 258 ||||| Sbjct 7237 CTGTC 7233 >seq6258 Length=5630 Score = 268 bits (296), Expect = 1e-69 Identities = 203/237 (86%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2210 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 2269 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | || ||| | ||||||||||||||||| ||| Sbjct 2270 CCTGTTATTGCCTCAAACTTCCGCGGCCTAAAAGGCCGTAGTCCCTCTAAGAAGCTGGCC 2329 Query 122 ACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | || ||| || |||| |||||||| | ||||||||||||||| ||||||| Sbjct 2330 GCGAAGGGATACCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 2389 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2390 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 2446 >seq23045 Length=54208 Score = 246 bits (272), Expect = 5e-63 Identities = 203/245 (83%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 13812 TCAGTATAGCGCGCGTGTGGCCCAGAGCATCTAAGGGCATCACAGACCTGTTATTGCCTC 13871 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-ATAG-T 133 ||| || | | || ||| | ||||||||||||||| | |||||| || ||| | Sbjct 13872 AAAATTTTGTGGCCTAAAAGGCCTTAGTCCCTCTAAGAATCTAGCCACGAAGGGATACCT 13931 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | ||| |||||||| | ||||||||||||||| | ||||||||| |||||||| Sbjct 13932 CCACATATCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAATGAAATTAACCAAACAAATCA 13991 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 || |||||||||||||||||||| || ||||||| ||||||| ||||||||||| ||| | Sbjct 13992 CTTCACCAACTAAGAACGGCCATCCAACACCACCTATAGAATTAAGAAAGAGCTCTCAGT 14051 Query 254 CTGTC 258 ||||| Sbjct 14052 CTGTC 14056 >seq20210 Length=53406 Score = 237 bits (262), Expect = 3e-60 Identities = 201/245 (82%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 || || ||| ||| ||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 22643 TCTGTATAGTGCGTGTGCGGCCCAGAACATCTAAGGGAATCACAGACCTATTATTGCCTC 22584 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-ATAG-T 133 |||||| | | || ||| | ||||||||||||||||| ||||| || ||| | Sbjct 22583 AAACTTTTGTGGCCTAAAAGGCCTTAGTCCCTCTAAGAAGCTGGCCACGAAGGGATACCT 22524 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | |||| |||||||| | ||||||| ||||||| | ||||||||| |||||| Sbjct 22523 CCACAAAGCTAGTTAGCAGGCTGAGGTCTCATTCGTTAATGAAATTAACCAAACAAATTG 22464 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||| ||||||||| |||||| |||||||||||||||||||| ||| | Sbjct 22463 CTCCACCAACTAAGAATGGCCATGCAACACCACTCATAGAATCAAGAAAGAGCTCTCAGT 22404 Query 254 CTGTC 258 ||||| Sbjct 22403 CTGTC 22399 >seq10560 Length=10975 Score = 235 bits (260), Expect = 9e-60 Identities = 209/259 (81%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||| |||||||||| ||||||| | Sbjct 1089 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAAAACATCTAAGAACATCACAAA 1148 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | || ||| ||||||||||||||||| |||| Sbjct 1149 CCTGTTATTGCCTCAAACTTCCGCGGCCTAAAAGGTCGTAGTCCCTCTAAGAAGCTAGCC 1208 Query 122 ACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | || ||| || |||| |||||||| | ||||||| ||| ||| |||||| Sbjct 1209 GCGAAAGGATACCTCTGCATAGCTAGTTAGCAGGCTGAGGTCTCATTCATTAATGGAATT 1268 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 ||| ||||||||| ||||||||||||| || || |||||||||||||||||| ||||||| Sbjct 1269 AACTAGACAAATCGCTCCACCAACTAATAATGGGCATGCACCACCACCCATACAATCAAG 1328 Query 240 AAAGAGCTATCAATCTGTC 258 ||||| | ||| |||||| Sbjct 1329 AAAGAATTCTCAGTCTGTC 1347 >seq18576 Length=25438 Score = 223 bits (246), Expect = 6e-56 Identities = 194/240 (81%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 20 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAAC 79 |||||| |||||||| ||| |||||||||||| |||||| |||||||||| |||||||| Sbjct 8647 TGTAGCATGCGTGCGGTCCATAACATCTAAGGGTATCACAAACCTGTTATTACCTCAAAC 8706 Query 80 TTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAG-TCGATG 138 |||| | | || || ||||||| |||||||||| |||| | || ||| || | Sbjct 8707 TTCCGTGGCCTAAAATATCATAGTCCTTCTAAGAAGCTAGCCGCAAAGGATACCTCCACA 8766 Query 139 GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCA 198 |||| |||||||| ||||||||| || |||| ||||||||||| | |||| ||||| Sbjct 8767 TAGCTAGTTAGCAGGCTAAGGTCTCATTTGTTAATGGAATTAACCAAATAAATTGCTCCA 8826 Query 199 CCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||| |||||||| ||||||| ||||||||||||||| || | | |||||| Sbjct 8827 CCAACTAAGAACGACCATGCACTACCACCCTTAGAATCAAGAAAGAACTCTTAGTCTGTC 8886 >seq26693 Length=159755 Score = 219 bits (242), Expect = 7e-55 Identities = 197/245 (80%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||| |||||||| || ||||||| |||||||||||||||| |||||| |||||||||| Sbjct 158669 TCAGTATAGCGCGCATGTGGCCCAGTACATCTAAGGGCATCATAGACCTATTATTGCCTC 158728 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-ATAG-T 133 ||| || | | || ||| | |||||| ||||||||| ||||| || ||| | Sbjct 158729 AAAATTTTGTGGCCTAAAAGGCCTTAGTCCGTCTAAGAAGATGGCCACAAAGGGATACCT 158788 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | |||| |||||||| | ||||||||||||||| || ||||||||| |||||| Sbjct 158789 CCACATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGAAATTAACCAAACAAATTG 158848 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||| |||| |||||||| ||| ||||||||||| ||||||||||| | | | Sbjct 158849 CTCCACCAACTATGAACAGCCATGCAACACTACCCATAGAATTAAGAAAGAGCTCTTAGT 158908 Query 254 CTGTC 258 ||||| Sbjct 158909 CTGTC 158913 >seq24839 Length=78981 Score = 197 bits (218), Expect = 2e-48 Identities = 164/198 (83%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||| |||||||||||||||| |||||||||||||| |||||| |||| ||||| Sbjct 60971 TCAGTGTAGCACGCGTGCGGCCCAGAAAATCTAAGGGCATCATAGACCTATTATAGCCTC 60912 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAA-CCATA-GT 133 |||||||| | || ||| | |||||||||||||||||| ||| | || ||| | Sbjct 60911 AAACTTCCGCGGCCTAAAAGGCCATAGTCCCTCTAAGAAGCTGGCCGCAAAGGGATACCT 60852 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | | || |||||||| | |||||||||| |||| ||||||||||||||||||||| Sbjct 60851 CCGTATAGATAGTTAGCAGGCTGAGGTCTCGTTAGTTAACGGAATTAACCAGACAAATCA 60792 Query 194 CTCCACCAACTAAGAACG 211 |||||| ||||||||||| Sbjct 60791 CTCCACTAACTAAGAACG 60774 >seq26536 Length=152591 Score = 185 bits (204), Expect = 1e-44 Identities = 191/246 (78%), Gaps = 3/246 (1%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| ||||||| || ||| |||| || |||||||||||||| |||||| ||||||| | Sbjct 103722 TCATTGTAGCGTGCATGCAACCCAAAAAATCTAAGGGCATCATAGACCTATTATTGCGTT 103663 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-ATAG-T 133 |||||||| | | ||| | |||||| |||||||||| |||| || ||| | Sbjct 103662 AAACTTCCGGGGCGTAAAAGACCGTAGTCCTTCTAAGAAGCTGGCCATGAAGGGATACAT 103603 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA-TTAACCAGACAAATC 192 | || | || |||| ||| | | ||||| ||||||| | ||| ||||| |||||||| Sbjct 103602 CCATATAGTTAGTTAGTAGGCTGATGTCTCATTCGTTAACAGAAATTAACTAGACAAATT 103543 Query 193 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252 ||| | ||||||||||||||||| ||||||||||||||||||||| |||||||| | | Sbjct 103542 GCTCTAACAACTAAGAACGGCCATACACCACCACCCATAGAATCAAAAAAGAGCTCTTAG 103483 Query 253 TCTGTC 258 |||||| Sbjct 103482 TCTGTC 103477 >seq14993 Length=24807 Score = 183 bits (202), Expect = 5e-44 Identities = 180/228 (79%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||| |||| ||||| |||||||||||||||||||||||| |||||| ||| || ||| Sbjct 935 TCAGTAAAGCGTGCGTGTGGCCCAGAACATCTAAGGGCATCAAAGACCTATTAATGGCTC 876 Query 76 AAAC--TTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-ATAG 132 |||| || || | || ||| |||||||||| ||||||| | |||| || ||| Sbjct 875 AAACGTTTGCA--GACTAAAAGGTCATAGTCCCTCAAAGAAGCTATCCACGAAGGGATAC 818 Query 133 -TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 || |||| |||| ||| | ||||||| ||||||| | |||||||||| |||||| Sbjct 817 CTCCGCATAGCTAGTTAGTAGGCTGAGGTCTCCTTCGTTAACAGAATTAACCAAACAAAT 758 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 ||| |||||||||||| ||||||||||||||||| |||| |||||| Sbjct 757 TGCTCTACCAACTAAGAATGGCCATGCACCACCACCTATAGGATCAAG 710 >seq23165 Length=55497 Score = 154 bits (170), Expect = 2e-35 Identities = 155/199 (78%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||| |||||||||||| |||||||||||||||| |||||||||| |||| Sbjct 49562 TCAGTGTAGCGCGCATGCGGCCCAGAATATCTAAGGGCATCACAAACCTGTTATTACCTC 49621 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAA-CCATA-GT 133 ||||||||| || ||| | ||||||||||||||||| ||| || ||| | Sbjct 49622 AAACTTCCACGACCTAAAAGGCCGTAGTCCCTCTAAGAAGCTGGCCGTGAAGGGATACCT 49681 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | |||| ||| || | | ||||||| ||||||| ||||||||||| | | || Sbjct 49682 CTGCCTAGCTAGTTATCAAGCTGAGGTCTCATTCGTTAATGGAATTAACCAAAAACATTG 49741 Query 194 CTCCACCAACTAAGAACGG 212 |||||| ||||||||| || Sbjct 49742 CTCCACTAACTAAGAATGG 49760 >seq26345 Length=124598 Score = 98.7 bits (108), Expect = 2e-18 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 105 CCTCTAAGAAGCCAGCCACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCT 162 |||||||||||| |||| || ||| || || |||| ||||| ||| |||||| Sbjct 109657 CCTCTAAGAAGCTGGCCATGAAGGGATACCTCCATATAGCTAGTTAGCTCGTTGAGGTCT 109716 Query 163 CGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCA 222 |||| || || ||||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct 109717 TGTTCACTAACGAAATTAACCACACAAATCGCTCCACCAACTAAGAACAACCATGCACCA 109776 Query 223 CCA 225 ||| Sbjct 109777 CCA 109779 >seq13315 Length=16931 Score = 91.5 bits (100), Expect = 2e-16 Identities = 50/50 (100%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 33 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 82 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16628 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 16579 >seq19565 Length=29191 Score = 86.0 bits (94), Expect = 1e-14 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 47 TAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCC 106 ||||||||||||||||||||||||||||||||||||| | || ||| | ||||||| Sbjct 23906 TAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGCGGCCTAAAAGGCCGTAGTCCC 23965 Query 107 TCTAAGAAGC 116 |||||||||| Sbjct 23966 TCTAAGAAGC 23975 >seq25675 Length=96829 Score = 73.4 bits (80), Expect = 6e-11 Identities = 61/75 (81%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 42 ACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATA 101 ||||||||||| ||||||||||| ||||| ||| ||| ||| || | | ||| ||| Sbjct 30831 ACATCTAAGGGTATCACAGACCTATTATTACCTTAAAATTCTATGGCCCAAAAGGTCATA 30772 Query 102 GTCCCTCTAAGAAGC 116 ||||||||||||||| Sbjct 30771 GTCCCTCTAAGAAGC 30757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796538534313