Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq23543 143 5e-32 seq14999 131 3e-28 seq21415 125 1e-26 seq25160 113 9e-23 seq22847 111 3e-22 seq24790 107 4e-21 seq22933 107 4e-21 seq15791 98.7 2e-18 seq12832 98.7 2e-18 seq23972 89.7 1e-15 seq20623 89.7 1e-15 seq26991 87.8 4e-15 seq21230 82.4 1e-13 seq33832 75.2 2e-11 seq33568 73.4 8e-11 seq19879 73.4 8e-11 >seq23543 Length=59522 Score = 143 bits (158), Expect = 5e-32 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 |||||| |||| | ||||| | ||||| |||||||||| |||| |||||| Sbjct 2932 GACAGTCTCAGGTAGATAGTTTCTATAGGGCGTAGGCCTCCCAAAAGGTAATGGAGGCAT 2991 Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGTGT 231 |||||| | |||| | ||||||| | || | | |||||||||||| ||||| | Sbjct 2992 CCAAAGGTTTCCTCGGGCCGGATGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGAGC 3050 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291 |||||| | | |||| | || |||||||||||||||| | |||| ||||| | |||| Sbjct 3051 TTGACTACAAGACCCACTCATCGAGCAGGGACGAAAGTCAGCCTTAGTGATCTGATGGTG 3110 Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||| ||||| || |||||||| | ||||||||| ||| || |||||| Sbjct 3111 CTGAGTGGAAGGGTCGTCGCTCAATGGATAAAAGTTACTCTAGGGATA 3158 >seq14999 Length=15340 Score = 131 bits (144), Expect = 3e-28 Identities = 98/115 (85%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 ||||||| |||| ||||| | |||||||| | |||| | ||| |||||||| ||||||| Sbjct 13044 AGTGCAATGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGATGAAAGTC 12985 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAG 325 || |||| ||||||| ||||||||| ||||| ||||||||||| ||||||||||| Sbjct 12984 GGCCTTAGTGATCCGACGGTGCTGAGTGGAAGGGCCGTCGCTCAACGGATAAAAG 12930 >seq21415 Length=40362 Score = 125 bits (138), Expect = 1e-26 Identities = 153/204 (75%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 140 GGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAA 199 ||||| |||||||||| |||||||||||| ||||||| |||||| || ||| Sbjct 24534 GGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGATTTCCTCAGACCCGACGGAG 24475 Query 200 ACCATG-CGCAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGC 257 | || | | | || ||||||||| ||||| | ||| ||| | |||| ||| ||| Sbjct 24474 AT--TGACCCTCGAGCGCAAAGGCAGAAGGGAGCATGATTGCAAGACCCATCCGTCGAGC 24417 Query 258 AGGGACGAAAGTCGGGCTT--AATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGA 315 |||||||||||| || ||| | ||||||| ||||| |||||||| |||| | |||| | Sbjct 24416 AGGGACGAAAGTTGGCCTTTTAGTGATCCGATGGTGCCGAATGGAAGGGCCATTGCTCAA 24357 Query 316 CGGATAAAAGCTACCCTGGGGATA 339 |||||||||| || || |||||| Sbjct 24356 CGGATAAAAGTTATTCTAGGGATA 24333 >seq25160 Length=82789 Score = 113 bits (124), Expect = 9e-23 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292 ||||||| | |||| | || |||||||||||||||||| |||| ||||||| |||||| Sbjct 17746 TGACTGCAAGACCCACCCATCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGC 17687 Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || ||||| ||||||||||| || |||||||| ||| || |||||| Sbjct 17686 CGAGTGGAAGGGCCGTCGCTCAACAGATAAAAGTTACTCTAGGGATA 17640 >seq22847 Length=52392 Score = 111 bits (122), Expect = 3e-22 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||| ||||||||||| | |||||||||| |||| | || ||||| ||||||||| Sbjct 24852 AGTGCATAGGCAAAAGGGAGCTTGACTGCGAGACCCACCCCTCGAGCAGAGACGAAAGTT 24793 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 || ||| ||||| | ||||| || ||||| |||||||||| | |||||||| ||| Sbjct 24792 GGCTTTAGTGATCTGTCGGTGTCGAGTGGAAGGGCCGTCGCTAAATGGATAAAAATTACT 24733 Query 331 CTGGGGATA 339 || |||||| Sbjct 24732 CTAGGGATA 24724 >seq24790 Length=106782 Score = 107 bits (118), Expect = 4e-21 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| ||| | | |||||||| | |||| | ||| || ||||||||||||| Sbjct 50897 AGTGCAAAGGCAGAAGAGAGCTTGACTGCAAGACCCACCTGTCAAGAAGGGACGAAAGTC 50956 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 || |||| ||||||| ||||| || | || || | |||||| | ||||||| | ||| Sbjct 50957 GGCCTTAGTGATCCGATGGTGCCAAAGGTAAGGGTCATCGCTCAATGGATAAATGTTACT 51016 Query 331 CTGGGGATA 339 || |||||| Sbjct 51017 CTAGGGATA 51025 >seq22933 Length=72701 Score = 107 bits (118), Expect = 4e-21 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169 ||||||| || || ||| ||||| ||||||||| |||||| ||||||||||||||| Sbjct 39196 CGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGG 39137 Query 170 CGCCCAAAGATACCCTCA-GCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGG 228 | | ||| || |||| ||| ||| | || || | || || | ||| Sbjct 39136 TGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAGC-----GTAATGGTATAAGCC 39082 Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288 || |||||| || ||| | ||| | ||| |||||||||||| | || |||||||| Sbjct 39081 TGCCTGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGA 39022 Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || | | ||||| ||| |||||| |||||| |||| ||| | ||||||| Sbjct 39021 GTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATA 38971 >seq15791 Length=17111 Score = 98.7 bits (108), Expect = 2e-18 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 223 AAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGAT 282 |||||| | |||| ||| | |||| | || | ||||||||||||||| |||| |||| Sbjct 983 AAAGGGAGCTTGATTGCAAAACCCACCCATCGAACAGGGACGAAAGTCGACCTTAGTGAT 1042 Query 283 CCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTAC 329 | | |||||| || ||||| ||||||||||| ||||||||||| ||| Sbjct 1043 CTGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTAC 1089 >seq12832 Length=11167 Score = 98.7 bits (108), Expect = 2e-18 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 251 GTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCG 310 ||| |||||||| ||||||||| |||| ||||||| |||||| || ||||| |||||||| Sbjct 6 GTCGAGCAGGGATGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCG 65 Query 311 CTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| | |||||||| ||| || |||||| Sbjct 66 CTCAATCGATAAAAGTTACTCTAGGGATA 94 >seq23972 Length=64532 Score = 89.7 bits (98), Expect = 1e-15 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 236 CTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGA 295 |||| | |||| | ||| |||||||| ||||||||| |||| |||| || ||||| || Sbjct 5999 CTGCAAGACCCACCCGTCGAGCAGGGATGAAAGTCGGCCTTAGTGATTCGATGGTGCCGA 6058 Query 296 ATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||||| || |||| || ||||||||||| ||| || |||||| Sbjct 6059 GTGGAAGGGTCGTCACTTAACGGATAAAAGTTACTCTAGGGATA 6102 >seq20623 Length=78569 Score = 89.7 bits (98), Expect = 1e-15 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 251 GTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCG 310 ||| |||||||||||||||||| |||| ||||||| |||||| || ||||| |||||||| Sbjct 1756 GTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCG 1815 Query 311 CTCGACGGATAA 322 ||| ||||| || Sbjct 1816 CTCAACGGAAAA 1827 >seq26991 Length=496141 Score = 87.8 bits (96), Expect = 4e-15 Identities = 99/132 (75%), Gaps = 3/132 (2%) Strand=Plus/Plus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||||||||| | |||||||| | || | | ||| || ||||| ||||||| Sbjct 147351 AGTGCAAAGGCAAAAGGGAGCTTGACTGCAAGACGCACCGGTCGAGTAGGGAGGAAAGTC 147410 Query 271 GGGCTTAATGAT---CCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCT 327 || |||| |||| || | | | | ||||| |||| || ||| | |||| |||| | Sbjct 147411 GGCCTTAGTGATTCAACGACAGGCCCAAGTGGAAGGGCCATCACTCAATGGATTAAAGTT 147470 Query 328 ACCCTGGGGATA 339 || || |||||| Sbjct 147471 ACTCTAGGGATA 147482 >seq21230 Length=68637 Score = 82.4 bits (90), Expect = 1e-13 Identities = 127/175 (73%), Gaps = 5/175 (3%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAA-AGAGTAACGGAGG 169 |||||||| |||| | |||||| ||| || ||||||||| || ||| |||||| Sbjct 15133 GGGACAGTCTCAGGTAGACAGTTTCTATGGTGCATAGGCCTCCCAACAGGGTA-CGGAGG 15075 Query 170 CGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGG 228 || ||||||| ||| | ||| ||| | || | | |||||||||||| ||||| Sbjct 15074 CGGACAAAGATTTTCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGG 15016 Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATC 283 | |||||||| | | || | ||| || ||||||||||||| | |||| ||||| Sbjct 15015 AGCTTGACTGCAAGATCCAC-CGTCGAGTAGGGACGAAAGTCAGCCTTAGTGATC 14962 >seq33832 Length=32535 Score = 75.2 bits (82), Expect = 2e-11 Identities = 94/129 (73%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| ||| | | |||||| | | || | | || ||||||| ||||||| Sbjct 11690 AGTGCAAAGGCAGAAGAGAGCTTGACTACAAGACTCACCCATCGAGCAGGGCTGAAAGTC 11749 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 |||| ||||| | ||| || ||||| |||| || ||| | |||||||| ||| Sbjct 11750 AACCTTAGTGATCTGAGAATGCCGAGTGGAAGGGCCATCACTCAAGAGATAAAAGTTACT 11809 Query 331 CTGGGGATA 339 || |||||| Sbjct 11810 CTAGGGATA 11818 >seq33568 Length=18330 Score = 73.4 bits (80), Expect = 8e-11 Identities = 54/63 (86%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 263 CGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAA 322 |||||||| | |||| ||||||| | ||||||| ||||| ||||||||||| | |||||| Sbjct 17284 CGAAAGTCAGCCTTAGTGATCCGACAGTGCTGAGTGGAAGGGCCGTCGCTCAATGGATAA 17343 Query 323 AAG 325 ||| Sbjct 17344 AAG 17346 >seq19879 Length=35067 Score = 73.4 bits (80), Expect = 8e-11 Identities = 92/125 (74%), Gaps = 1/125 (1%) Strand=Plus/Plus Query 216 AAAGGCAAAAGGGTG-TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGC 274 ||||||||||||| | ||||||||| | |||| | || || | ||||||||||| | | Sbjct 1550 AAAGGCAAAAGGGAGCTTTGACTGCAAGACCCACCCATCGAGTAAGGACGAAAGTCAGCC 1609 Query 275 TTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGG 334 ||| ||||| | ||| | |||| ||| |||| ||| ||||||| ||| || | Sbjct 1610 TTAGCGATCCAATGATGCCAAGTGGACAAGCCACTGCTCAACGAATAAAAGTTACTCTAG 1669 Query 335 GGATA 339 ||||| Sbjct 1670 GGATA 1674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982067231648