Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30]
33,873 sequences; 833,080,760 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq23543 143 5e-32
seq14999 131 3e-28
seq21415 125 1e-26
seq25160 113 9e-23
seq22847 111 3e-22
seq24790 107 4e-21
seq22933 107 4e-21
seq15791 98.7 2e-18
seq12832 98.7 2e-18
seq23972 89.7 1e-15
seq20623 89.7 1e-15
seq26991 87.8 4e-15
seq21230 82.4 1e-13
seq33832 75.2 2e-11
seq33568 73.4 8e-11
seq19879 73.4 8e-11
>seq23543
Length=59522
Score = 143 bits (158), Expect = 5e-32
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172
|||||| |||| | ||||| | ||||| |||||||||| |||| ||||||
Sbjct 2932 GACAGTCTCAGGTAGATAGTTTCTATAGGGCGTAGGCCTCCCAAAAGGTAATGGAGGCAT 2991
Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGTGT 231
|||||| | |||| | ||||||| | || | | |||||||||||| ||||| |
Sbjct 2992 CCAAAGGTTTCCTCGGGCCGGATGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGAGC 3050
Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291
|||||| | | |||| | || |||||||||||||||| | |||| ||||| | ||||
Sbjct 3051 TTGACTACAAGACCCACTCATCGAGCAGGGACGAAAGTCAGCCTTAGTGATCTGATGGTG 3110
Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|||| ||||| || |||||||| | ||||||||| ||| || ||||||
Sbjct 3111 CTGAGTGGAAGGGTCGTCGCTCAATGGATAAAAGTTACTCTAGGGATA 3158
>seq14999
Length=15340
Score = 131 bits (144), Expect = 3e-28
Identities = 98/115 (85%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
||||||| |||| ||||| | |||||||| | |||| | ||| |||||||| |||||||
Sbjct 13044 AGTGCAATGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGATGAAAGTC 12985
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAG 325
|| |||| ||||||| ||||||||| ||||| ||||||||||| |||||||||||
Sbjct 12984 GGCCTTAGTGATCCGACGGTGCTGAGTGGAAGGGCCGTCGCTCAACGGATAAAAG 12930
>seq21415
Length=40362
Score = 125 bits (138), Expect = 1e-26
Identities = 153/204 (75%), Gaps = 6/204 (3%)
Strand=Plus/Minus
Query 140 GGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAA 199
||||| |||||||||| |||||||||||| ||||||| |||||| || |||
Sbjct 24534 GGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGATTTCCTCAGACCCGACGGAG 24475
Query 200 ACCATG-CGCAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGC 257
| || | | | || ||||||||| ||||| | ||| ||| | |||| ||| |||
Sbjct 24474 AT--TGACCCTCGAGCGCAAAGGCAGAAGGGAGCATGATTGCAAGACCCATCCGTCGAGC 24417
Query 258 AGGGACGAAAGTCGGGCTT--AATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGA 315
|||||||||||| || ||| | ||||||| ||||| |||||||| |||| | |||| |
Sbjct 24416 AGGGACGAAAGTTGGCCTTTTAGTGATCCGATGGTGCCGAATGGAAGGGCCATTGCTCAA 24357
Query 316 CGGATAAAAGCTACCCTGGGGATA 339
|||||||||| || || ||||||
Sbjct 24356 CGGATAAAAGTTATTCTAGGGATA 24333
>seq25160
Length=82789
Score = 113 bits (124), Expect = 9e-23
Identities = 89/107 (83%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292
||||||| | |||| | || |||||||||||||||||| |||| ||||||| ||||||
Sbjct 17746 TGACTGCAAGACCCACCCATCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGC 17687
Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| ||||| ||||||||||| || |||||||| ||| || ||||||
Sbjct 17686 CGAGTGGAAGGGCCGTCGCTCAACAGATAAAAGTTACTCTAGGGATA 17640
>seq22847
Length=52392
Score = 111 bits (122), Expect = 3e-22
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||| ||||||||||| | |||||||||| |||| | || ||||| |||||||||
Sbjct 24852 AGTGCATAGGCAAAAGGGAGCTTGACTGCGAGACCCACCCCTCGAGCAGAGACGAAAGTT 24793
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330
|| ||| ||||| | ||||| || ||||| |||||||||| | |||||||| |||
Sbjct 24792 GGCTTTAGTGATCTGTCGGTGTCGAGTGGAAGGGCCGTCGCTAAATGGATAAAAATTACT 24733
Query 331 CTGGGGATA 339
|| ||||||
Sbjct 24732 CTAGGGATA 24724
>seq24790
Length=106782
Score = 107 bits (118), Expect = 4e-21
Identities = 101/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||||| ||| | | |||||||| | |||| | ||| || |||||||||||||
Sbjct 50897 AGTGCAAAGGCAGAAGAGAGCTTGACTGCAAGACCCACCTGTCAAGAAGGGACGAAAGTC 50956
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330
|| |||| ||||||| ||||| || | || || | |||||| | ||||||| | |||
Sbjct 50957 GGCCTTAGTGATCCGATGGTGCCAAAGGTAAGGGTCATCGCTCAATGGATAAATGTTACT 51016
Query 331 CTGGGGATA 339
|| ||||||
Sbjct 51017 CTAGGGATA 51025
>seq22933
Length=72701
Score = 107 bits (118), Expect = 4e-21
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169
||||||| || || ||| ||||| ||||||||| |||||| |||||||||||||||
Sbjct 39196 CGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGG 39137
Query 170 CGCCCAAAGATACCCTCA-GCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGG 228
| | ||| || |||| ||| ||| | || || | || || | |||
Sbjct 39136 TGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAGC-----GTAATGGTATAAGCC 39082
Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288
|| |||||| || ||| | ||| | ||| |||||||||||| | || ||||||||
Sbjct 39081 TGCCTGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGA 39022
Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| | | ||||| ||| |||||| |||||| |||| ||| | |||||||
Sbjct 39021 GTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATA 38971
>seq15791
Length=17111
Score = 98.7 bits (108), Expect = 2e-18
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 223 AAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGAT 282
|||||| | |||| ||| | |||| | || | ||||||||||||||| |||| ||||
Sbjct 983 AAAGGGAGCTTGATTGCAAAACCCACCCATCGAACAGGGACGAAAGTCGACCTTAGTGAT 1042
Query 283 CCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTAC 329
| | |||||| || ||||| ||||||||||| ||||||||||| |||
Sbjct 1043 CTGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTAC 1089
>seq12832
Length=11167
Score = 98.7 bits (108), Expect = 2e-18
Identities = 75/89 (84%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 251 GTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCG 310
||| |||||||| ||||||||| |||| ||||||| |||||| || ||||| ||||||||
Sbjct 6 GTCGAGCAGGGATGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCG 65
Query 311 CTCGACGGATAAAAGCTACCCTGGGGATA 339
||| | |||||||| ||| || ||||||
Sbjct 66 CTCAATCGATAAAAGTTACTCTAGGGATA 94
>seq23972
Length=64532
Score = 89.7 bits (98), Expect = 1e-15
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 236 CTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGA 295
|||| | |||| | ||| |||||||| ||||||||| |||| |||| || ||||| ||
Sbjct 5999 CTGCAAGACCCACCCGTCGAGCAGGGATGAAAGTCGGCCTTAGTGATTCGATGGTGCCGA 6058
Query 296 ATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||||| || |||| || ||||||||||| ||| || ||||||
Sbjct 6059 GTGGAAGGGTCGTCACTTAACGGATAAAAGTTACTCTAGGGATA 6102
>seq20623
Length=78569
Score = 89.7 bits (98), Expect = 1e-15
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 251 GTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCG 310
||| |||||||||||||||||| |||| ||||||| |||||| || ||||| ||||||||
Sbjct 1756 GTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCG 1815
Query 311 CTCGACGGATAA 322
||| ||||| ||
Sbjct 1816 CTCAACGGAAAA 1827
>seq26991
Length=496141
Score = 87.8 bits (96), Expect = 4e-15
Identities = 99/132 (75%), Gaps = 3/132 (2%)
Strand=Plus/Plus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||||||||||| | |||||||| | || | | ||| || ||||| |||||||
Sbjct 147351 AGTGCAAAGGCAAAAGGGAGCTTGACTGCAAGACGCACCGGTCGAGTAGGGAGGAAAGTC 147410
Query 271 GGGCTTAATGAT---CCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCT 327
|| |||| |||| || | | | | ||||| |||| || ||| | |||| |||| |
Sbjct 147411 GGCCTTAGTGATTCAACGACAGGCCCAAGTGGAAGGGCCATCACTCAATGGATTAAAGTT 147470
Query 328 ACCCTGGGGATA 339
|| || ||||||
Sbjct 147471 ACTCTAGGGATA 147482
>seq21230
Length=68637
Score = 82.4 bits (90), Expect = 1e-13
Identities = 127/175 (73%), Gaps = 5/175 (3%)
Strand=Plus/Minus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAA-AGAGTAACGGAGG 169
|||||||| |||| | |||||| ||| || ||||||||| || ||| ||||||
Sbjct 15133 GGGACAGTCTCAGGTAGACAGTTTCTATGGTGCATAGGCCTCCCAACAGGGTA-CGGAGG 15075
Query 170 CGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGG 228
|| ||||||| ||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 15074 CGGACAAAGATTTTCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGG 15016
Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATC 283
| |||||||| | | || | ||| || ||||||||||||| | |||| |||||
Sbjct 15015 AGCTTGACTGCAAGATCCAC-CGTCGAGTAGGGACGAAAGTCAGCCTTAGTGATC 14962
>seq33832
Length=32535
Score = 75.2 bits (82), Expect = 2e-11
Identities = 94/129 (73%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||||| ||| | | |||||| | | || | | || ||||||| |||||||
Sbjct 11690 AGTGCAAAGGCAGAAGAGAGCTTGACTACAAGACTCACCCATCGAGCAGGGCTGAAAGTC 11749
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330
|||| ||||| | ||| || ||||| |||| || ||| | |||||||| |||
Sbjct 11750 AACCTTAGTGATCTGAGAATGCCGAGTGGAAGGGCCATCACTCAAGAGATAAAAGTTACT 11809
Query 331 CTGGGGATA 339
|| ||||||
Sbjct 11810 CTAGGGATA 11818
>seq33568
Length=18330
Score = 73.4 bits (80), Expect = 8e-11
Identities = 54/63 (86%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 263 CGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAA 322
|||||||| | |||| ||||||| | ||||||| ||||| ||||||||||| | ||||||
Sbjct 17284 CGAAAGTCAGCCTTAGTGATCCGACAGTGCTGAGTGGAAGGGCCGTCGCTCAATGGATAA 17343
Query 323 AAG 325
|||
Sbjct 17344 AAG 17346
>seq19879
Length=35067
Score = 73.4 bits (80), Expect = 8e-11
Identities = 92/125 (74%), Gaps = 1/125 (1%)
Strand=Plus/Plus
Query 216 AAAGGCAAAAGGGTG-TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGC 274
||||||||||||| | ||||||||| | |||| | || || | ||||||||||| | |
Sbjct 1550 AAAGGCAAAAGGGAGCTTTGACTGCAAGACCCACCCATCGAGTAAGGACGAAAGTCAGCC 1609
Query 275 TTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGG 334
||| ||||| | ||| | |||| ||| |||| ||| ||||||| ||| || |
Sbjct 1610 TTAGCGATCCAATGATGCCAAGTGGACAAGCCACTGCTCAACGAATAAAAGTTACTCTAG 1669
Query 335 GGATA 339
|||||
Sbjct 1670 GGATA 1674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982067231648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |