Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30]
33,873 sequences; 833,080,760 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq22933 98.7 1e-18
seq14491 98.7 1e-18
seq26872 96.9 4e-18
seq22685 86.0 7e-15
seq23543 84.2 2e-14
seq24357 78.8 1e-12
seq23113 75.2 1e-11
>seq22933
Length=72701
Score = 98.7 bits (108), Expect = 1e-18
Identities = 110/151 (73%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
||||||||| |||| || |||| || |||||||||| || | | |||||||||
Sbjct 39341 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCA 39400
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| || | ||||||| |||||||||| |||||||| ||||| |
Sbjct 39401 AGTCCATGTCGGAGACAGCGAGGCAGTCATTACACCATTCATGCAGGTCACTACTTATGC 39460
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||| ||||
Sbjct 39461 GACAAGGAATTTCGCTACCTTAGGACAGTTA 39491
>seq14491
Length=14244
Score = 98.7 bits (108), Expect = 1e-18
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| | |||||||||| || | | ||||||| |||
Sbjct 5879 GGGTCTTTCTGTCCATGTGCAGGTAGTTCGCATCTTCACAGACATGTCTATTTCACCGAG 5938
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 5939 C-CTCTCTCCGAGACAGTGCCCAGATCATTACGCCTTTCGTGCGGGTCGGAACTTACCCG 5997
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||| |||||||||||
Sbjct 5998 ACAAGGAATTTCGCTACCGTAGGACCGTTA 6027
>seq26872
Length=198302
Score = 96.9 bits (106), Expect = 4e-18
Identities = 56/58 (97%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 116 ACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149767 ACCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 149710
>seq22685
Length=69099
Score = 86.0 bits (94), Expect = 7e-15
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|| ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 11126 CCTTTCGTGCGGATCGGAACTTACCCGATAAGGAATTTCGCTACCTTAGGACCGTTA 11182
>seq23543
Length=59522
Score = 84.2 bits (92), Expect = 2e-14
Identities = 97/132 (73%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 43 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGN 101
|| |||| || |||||||||| || | | |||||||||||| | | | |||| ||
Sbjct 2753 GCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACTGAGC-CTCTCTCCGAGATAGT 2695
Query 102 NNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161
||| || || |||||||||| ||||||||||| ||||||||| |||||
Sbjct 2694 GCCTAGATCATTACGCCTTTTGTGCAGGTCGAAACTTACCCGATAAGGAATTTTTCTACC 2635
Query 162 TTAGGACCGTTA 173
||||||||||||
Sbjct 2634 TTAGGACCGTTA 2623
>seq24357
Length=69320
Score = 78.8 bits (86), Expect = 1e-12
Identities = 85/117 (73%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 46 GGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNN 105
|||| || |||||||||| || | | ||||||||| | | || | |||||||
Sbjct 24192 GGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGG 24251
Query 106 NNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 162
||||||||||||||| |||| ||||| ||||||||||||||| |||||
Sbjct 24252 CAGTCGTTACACCATTCGTGCAAGTCGCTACTTATGCGACAAGGAATTTCGGTACCT 24308
>seq23113
Length=55029
Score = 75.2 bits (82), Expect = 1e-11
Identities = 53/61 (87%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || ||||||| ||||| ||||||| || |||||||||||||||||||||||| ||
Sbjct 9320 TACGCCTTTCGTGCGGGTCGAGACTTACCTGATAAGGAATTTCGCTACCTTAGGACCATT 9379
Query 173 A 173
|
Sbjct 9380 A 9380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547020439227
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |