Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq22933 98.7 1e-18 seq14491 98.7 1e-18 seq26872 96.9 4e-18 seq22685 86.0 7e-15 seq23543 84.2 2e-14 seq24357 78.8 1e-12 seq23113 75.2 1e-11 >seq22933 Length=72701 Score = 98.7 bits (108), Expect = 1e-18 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| || |||||||||| || | | ||||||||| Sbjct 39341 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCA 39400 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || || | ||||||| |||||||||| |||||||| ||||| | Sbjct 39401 AGTCCATGTCGGAGACAGCGAGGCAGTCATTACACCATTCATGCAGGTCACTACTTATGC 39460 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||| |||| Sbjct 39461 GACAAGGAATTTCGCTACCTTAGGACAGTTA 39491 >seq14491 Length=14244 Score = 98.7 bits (108), Expect = 1e-18 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| | |||||||||| || | | ||||||| ||| Sbjct 5879 GGGTCTTTCTGTCCATGTGCAGGTAGTTCGCATCTTCACAGACATGTCTATTTCACCGAG 5938 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 5939 C-CTCTCTCCGAGACAGTGCCCAGATCATTACGCCTTTCGTGCGGGTCGGAACTTACCCG 5997 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||| ||||||||||| Sbjct 5998 ACAAGGAATTTCGCTACCGTAGGACCGTTA 6027 >seq26872 Length=198302 Score = 96.9 bits (106), Expect = 4e-18 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 116 ACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 149767 ACCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 149710 >seq22685 Length=69099 Score = 86.0 bits (94), Expect = 7e-15 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || ||||||| | ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 11126 CCTTTCGTGCGGATCGGAACTTACCCGATAAGGAATTTCGCTACCTTAGGACCGTTA 11182 >seq23543 Length=59522 Score = 84.2 bits (92), Expect = 2e-14 Identities = 97/132 (73%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 43 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGN 101 || |||| || |||||||||| || | | |||||||||||| | | | |||| || Sbjct 2753 GCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACTGAGC-CTCTCTCCGAGATAGT 2695 Query 102 NNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161 ||| || || |||||||||| ||||||||||| ||||||||| ||||| Sbjct 2694 GCCTAGATCATTACGCCTTTTGTGCAGGTCGAAACTTACCCGATAAGGAATTTTTCTACC 2635 Query 162 TTAGGACCGTTA 173 |||||||||||| Sbjct 2634 TTAGGACCGTTA 2623 >seq24357 Length=69320 Score = 78.8 bits (86), Expect = 1e-12 Identities = 85/117 (73%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 46 GGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNN 105 |||| || |||||||||| || | | ||||||||| | | || | ||||||| Sbjct 24192 GGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGG 24251 Query 106 NNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 162 ||||||||||||||| |||| ||||| ||||||||||||||| ||||| Sbjct 24252 CAGTCGTTACACCATTCGTGCAAGTCGCTACTTATGCGACAAGGAATTTCGGTACCT 24308 >seq23113 Length=55029 Score = 75.2 bits (82), Expect = 1e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| ||||| ||||||| || |||||||||||||||||||||||| || Sbjct 9320 TACGCCTTTCGTGCGGGTCGAGACTTACCTGATAAGGAATTTCGCTACCTTAGGACCATT 9379 Query 173 A 173 | Sbjct 9380 A 9380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547020439227