Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq23543 149 2e-33 seq23279 147 5e-33 seq26676 132 1e-28 seq26091 125 2e-26 seq26156 113 1e-22 seq22933 98.7 2e-18 seq24244 93.3 1e-16 seq26947 87.8 4e-15 seq18182 87.8 4e-15 seq25400 86.0 2e-14 seq26245 80.6 7e-13 seq23788 77.0 8e-12 seq26501 75.2 3e-11 >seq23543 Length=59522 Score = 149 bits (164), Expect = 2e-33 Identities = 253/353 (72%), Gaps = 14/353 (4%) Strand=Plus/Minus Query 29 TTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCC 88 || |||||| ||||||||||| ||| || ||||| | |||||| ||| || |||| Sbjct 1386 TTCTTCAACATCAGTCGGTTCGGACCTTCACTTAGTT-TCACCCAAGCTT-CATCCTGGT 1329 Query 89 CATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGA 148 ||| ||||||||| || | ||| ||||| || | || ||| | ||||| |||| Sbjct 1328 CAT-GGATAGATCACCTAGGTTT-GGGTCCATAAGC-AGTGACAATTT-CCCTATGAAGA 1273 Query 149 CTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGC 206 ||| |||| |||||| |||| | ||| ||| | || |||| || |||||| Sbjct 1272 CTCACTTT-CGCTACAGCTCCGGTGGGTTCCCCTAACCAA-GCTACTGCCTATGAGTCGC 1215 Query 207 TGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACG 266 | | |||| | ||| ||| | || |||| | | | |||| ||| |||| | Sbjct 1214 CGGCTCATTCTTCAATAGGCATGCGGTCAG--AGCCCTGGCTACTCCTACTACTTGGGAG 1157 Query 267 CATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 326 | |||||||||| | ||||||||||||||| | |||||||||||| || |||||||| Sbjct 1156 CTTACGGTTTCATGTTCTATTTCACTCCCCGAT--GGGGTTCTTTTCACCCTTCCCTCAT 1099 Query 327 GGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCC 379 |||| || ||| |||| ||||| ||| |||||||||||||| | | |||||| Sbjct 1098 GGTATTACTTCGCTATTGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCC 1046 >seq23279 Length=56629 Score = 147 bits (162), Expect = 5e-33 Identities = 265/371 (71%), Gaps = 15/371 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| ||||| | || |||||| |||| ||||| |||||| ||||| | Sbjct 56529 CCACAGCTCAT-CCGCTGA-TTCTTCAACATCAGTCAGTTCGAACCTCCACTTAGTT-TC 56473 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||||| ||||||| ||| | || |||||| || | || Sbjct 56472 ACCCAAGCTT-CATCCTGGTCATAG-ATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 56417 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | |||||| |||||| |||| ||||| | ||| | ||| |||| | Sbjct 56416 GACAATT-GCCCTATAAAGACTTACTTT-CGCTATGACTCTAGTGGGTTCCCTTAACCAA 56359 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || | || | | |||| | ||| |||||||| |||| | | | Sbjct 56358 -GCCACTGCCTATGAATCTCCAGCTCATTCTTCAACAGGTACGCGGTCAG--AGCCCTGG 56302 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 || |||||||||| | || | ||||| | |||||||||||||| | ||||| Sbjct 56301 CTCCTGCCACTGCTTGGGAACTTATGATTTCATGTTCTATTTCACTCCCTGATG-GGGGT 56243 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| || |||||||||||||||| || |||||||||| ||| | |||||||||| Sbjct 56242 TCTTTTCACCCTTCCCTCACGGTACTACTTTGCTATCGGTCACCCAGGACTATTTAGCCT 56183 Query 367 TGGAGGATGGT 377 || | | |||| Sbjct 56182 TGCAAGGTGGT 56172 >seq26676 Length=200246 Score = 132 bits (146), Expect = 1e-28 Identities = 261/368 (71%), Gaps = 26/368 (7%) Strand=Plus/Minus Query 20 TCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTT 79 |||||| | || |||||| |||||| ||||| |||||| ||||| | |||||| ||| Sbjct 173294 TCCGCTGA-TTCTTCAACATTAGTCGATTCGGACCTCCACTTAGTT-TCACCCAAGCTT- 173238 Query 80 CAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCC 139 || |||| ||| |||||| || || | || || ||| || || ||| | ||| Sbjct 173237 CATCCTGGTCAT-GGATAGTTCACCTAGGTT-CGAGTCCATAAGT-AGTGACAATT-GCC 173182 Query 140 CTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT---ATTCGGTTAAGCTTTGCCACTGAA 196 ||| ||||||||| |||| ||||| || | | ||| |||| | ||||||| Sbjct 173181 CTATGAAGACTCGC-TTTCACTACGGCTTCGGTGGGGTTC-CTTAA-CCAAGCCACTGCC 173125 Query 197 AATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAG---TGG--GCT 251 || ||||| | |||| | ||| ||| |||| || ||||| ||| || Sbjct 173124 TATGAGTCGTCGGTTCATTCTTCAACAGGCACGC-GT------TCAAAGTCCTGGCTCCT 173072 Query 252 CCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTT 311 |||||||||| || ||| |||| | | ||||||||||||||| | |||||| ||| Sbjct 173071 CCCACTGCTTCGGAGCTTACAGTTTTATGTTCTATTTCACTCCCCGAT-AGGGGTTGTTT 173013 Query 312 TCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAG 371 || || |||||| || |||||| ||| ||||||| || ||| |||||||||||||| | Sbjct 173012 TCACCCTTCCCTTACAGTACTACTTCGCTATCGGCCACCCAGGAGTATTTAGCCTTGCAA 172953 Query 372 GATGGTCC 379 | |||||| Sbjct 172952 GGTGGTCC 172945 >seq26091 Length=165510 Score = 125 bits (138), Expect = 2e-26 Identities = 263/374 (70%), Gaps = 15/374 (4%) Strand=Plus/Minus Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62 ||| | ||||| |||| ||| | | || ||||| | |||||||||| |||| | ||| Sbjct 115865 TCCTACCCACAACTCAT-CCGTTGA-TTCTTCAATGTCAGTCGGTTCGAACCTCTATTTA 115808 Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122 || | |||||| ||||| | || ||| ||||| ||| ||| || || ||| || Sbjct 115807 GTT-TCACCCAAG-TTTCACCTTGGTCAT-GGATAAATCACCCACATT-CGAGTCCATAA 115752 Query 123 CCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA-TTCGGTTA 181 || || | ||| || |||||||||||| |||||||| ||| | ||| ||| Sbjct 115751 GT-AGTGAAAATT-GCCTTATGAAGACTCGCTTT-CGCTACGC-TCCAATGGTTCCCTTA 115696 Query 182 AGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC 241 | | ||||||| || |||||| || |||| | ||| ||| | |||| | | Sbjct 115695 ACCAA-GCCACTGCCTATGAGTCGCCAACTCATTCTTCAACAGGCAAACAGTTAGAGTCC 115637 Query 242 AAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCC 301 | | ||||||||||||| || |||| ||||| | | ||||||||| || | Sbjct 115636 TGACTC--CTCCCACTGCTTGGGAGCTTACGATTTCATGTTTTATTTCACTTCCGGATGA 115579 Query 302 GGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTT 361 ||| |||||||| || |||||||| ||||||| |||||||||| | | |||| ||||||| Sbjct 115578 GGG-TTCTTTTCACCCTTCCCTCATGGTACTACTTCACTATCGATTACTCAGGAGTATTT 115520 Query 362 AGCCTTGGAGGATG 375 |||||| | |||| Sbjct 115519 AGCCTTACAAGATG 115506 >seq26156 Length=156796 Score = 113 bits (124), Expect = 1e-22 Identities = 109/139 (78%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 282 TCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTA 341 ||||||||||||||| | |||||||||||| || |||||||||||||||| ||| ||| Sbjct 138429 TCTATTTCACTCCCCGATG-GGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTA 138371 Query 342 TCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTC 401 ||||||| ||| |||||||||||||| | | | |||| | ||||| || || | Sbjct 138370 TCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTAGTCCTTGCTGATTCACACGGGATTCC 138311 Query 402 TCGTGCTCCGTCCTACTCG 420 ||||| || | ||||||| Sbjct 138310 ACGTGCCCCATGCTACTCG 138292 >seq22933 Length=72701 Score = 98.7 bits (108), Expect = 2e-18 Identities = 101/130 (78%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| |||| | | ||||| ||| ||| ||||||| | |||||||||| Sbjct 41065 ACTGATTGTTCGCACCAGATCTCAGGTTCTCTATTGCACTCCC-TAAATAGGGTTCTTTT 41123 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 41124 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 41183 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 41184 GTGGTCCCCC 41193 >seq24244 Length=67969 Score = 93.3 bits (102), Expect = 1e-16 Identities = 246/361 (68%), Gaps = 26/361 (7%) Strand=Plus/Minus Query 21 CCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTC 80 || |||| || ||||| ||||||| | | |||||| ||||| | |||||| ||| | Sbjct 32258 CCACTAA-TTCTTCAATATCAGTCGGT-CAGACCTCCACTTAGTT-TCACCCAAGCTT-C 32203 Query 81 AACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCC 140 | | || ||||| ||||||| ||| || |||||| | | | || ||| | |||| Sbjct 32202 ATCTTGGTCATAG-ATAGATCACCCAAGTT-CGGGTCCAAATGC-AGTGACAATT-GCCC 32147 Query 141 TAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTGAAAA 198 | |||||||||||| ||||| |||| | ||| |||| | |||||| | Sbjct 32146 AATGAAGACTCGCTTT-CGCTATAGCTCCAATGGGTTCCCTTAACCAA-GCCACTTCCTA 32089 Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTG 258 | ||||||| | |||| | ||| ||| || | |||| | | | ||||||||| Sbjct 32088 TGAGTCGCTAGCTCATTCTTCAACAGGCACACGGTCAGAGCCCTAGCTC--CTCCCACTG 32031 Query 259 CTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318 |||| | || ||| ||||| | ||||||| ||||| | |||||||| || Sbjct 32030 CTTGGAAGCTTACACTTTCATGTTCTATTTAACTCC-----CGGGGGTTCT-------TT 31983 Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTC 378 ||||||| ||||| ||| |||| ||| || |||||||||||||| | | ||||| Sbjct 31982 ACCCTCACATTACTACTTCGCTATTGGTTGCCTAGGAGTATTTAGCCTTGCAAGGTGGTC 31923 Query 379 C 379 | Sbjct 31922 C 31922 >seq26947 Length=304023 Score = 87.8 bits (96), Expect = 4e-15 Identities = 121/168 (72%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 253 CCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTT 312 ||||| ||| || |||| ||| | | ||||||| ||| | | ||||||||||| Sbjct 147342 CCACTACTTAGGAGCTTACGATTTTATGTTCTATTTAACTACTTGATG-GGGGTTCTTTT 147284 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | || || ||||||||||||| || ||||| ||| | || |||||||||||||||| Sbjct 147283 CACCCTTTCCTCACGGTACTACTTTGCTATCAATCACTTAGGAGTATTTAGCCTTGGAAA 147224 Query 373 ATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||||| | ||||| | || || | | ||| || | ||||||| Sbjct 147223 GTGGTCCTTTCTCATTCACATAAGATTCCACATGCCCCATGCTACTCG 147176 >seq18182 Length=24039 Score = 87.8 bits (96), Expect = 4e-15 Identities = 100/131 (76%), Gaps = 4/131 (3%) Strand=Plus/Plus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| ||||||| | | |||||||||| Sbjct 17625 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCC-TAAACAGGGTTCTTTT 17683 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT-GGAG 371 | ||||| |||||||||||| || | ||||| |||| | || | || |||| || ||| Sbjct 17684 CACCTTTTCCTCACGGTACTCGTACGCTATCAGTCATTGAGGAATACTTAGTTTTAAGAG 17743 Query 372 GATGGTCCCCC 382 | ||||||||| Sbjct 17744 GGTGGTCCCCC 17754 >seq25400 Length=88376 Score = 86.0 bits (94), Expect = 2e-14 Identities = 115/156 (74%), Gaps = 3/156 (2%) Strand=Plus/Plus Query 266 GCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCA 325 || || |||| || | |||| ||||||||| | |||||||||||| |||| |||||| Sbjct 77489 GCTTATGGTTCCATGTTCTACTTCACTCCCAGATG-GGGGTTCTTTTCACCTT-CCCTCA 77546 Query 326 CGGTACTAGTTCACTATCGGTCA-GTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCA 384 |||||||| ||| ||||| | || || || ||||||| |||||| | | | |||| | Sbjct 77547 CGGTACTACTTCGCTATCAGCCACGTTAGGAGTATTTGGCCTTGCAAGGTAGTCCTTGCT 77606 Query 385 TATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||||| | |||| | ||| || | ||||||| Sbjct 77607 GATTCACATGGGATTTCACATGCCCCATGCTACTCG 77642 >seq26245 Length=119346 Score = 80.6 bits (88), Expect = 7e-13 Identities = 85/111 (77%), Gaps = 1/111 (1%) Strand=Plus/Plus Query 269 TACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGG 328 |||| ||||| | |||||||||||| | ||| |||||||| || || ||||| Sbjct 101227 TACGATTTCATGTTCTATTTCACTCTTTGATG-GGGTTTCTTTTCACCCCTCTTTCACGA 101285 Query 329 TACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCC 379 ||||| |||||||||||||| ||| ||| |||| ||||| | | |||||| Sbjct 101286 TACTACTTCACTATCGGTCACCCAGGAGTGTTTACCCTTGCAAGGTGGTCC 101336 >seq23788 Length=158121 Score = 77.0 bits (84), Expect = 8e-12 Identities = 87/117 (74%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 |||||||||| || |||||||||||||||| ||| ||||| || | || ||||||||| Sbjct 81396 GGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCAGTTATCCAAGAGTATTTAG 81337 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 | ||| | | ||||| | ||||| || || | ||||| || | ||||||| Sbjct 81336 CTTTGCAAGGTGGTCTTTACTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 81280 >seq26501 Length=208139 Score = 75.2 bits (82), Expect = 3e-11 Identities = 79/103 (77%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 266 GCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCA 325 || |||||||||| | ||||||| |||| || | | ||||||||| || ||| |||| Sbjct 12604 GCTTACGGTTTCATGTTCTATTTTACTCTCCGATA--GAGTTCTTTTCACCCTTCTCTCA 12661 Query 326 CGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTG 368 |||||||| | |||||| ||| || ||||||||||| || Sbjct 12662 CGGTACTACTCTGCTATCGATCACCTAGAAGTATTTAGCCCTG 12704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241179432832