Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq16137 109 5e-22 seq26496 104 2e-20 seq25839 100 2e-19 seq24244 95.1 1e-17 seq21845 89.7 4e-16 seq25111 87.8 1e-15 seq24120 80.6 2e-13 seq23024 73.4 3e-11 >seq16137 Length=20740 Score = 109 bits (120), Expect = 5e-22 Identities = 121/160 (76%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | | Sbjct 5080 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTTGCTCCGCCTTACAG 5138 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| |||| | |||||||| ||||||| |||| ||||||| |||||| Sbjct 5139 CCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAAGGCCAT 5198 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||||||||||| |||||||||||||||| || | |||| Sbjct 5199 ACGGACTTGACGTTATCCCCACCTTCCTCCAGTATATCAC 5238 >seq26496 Length=136319 Score = 104 bits (114), Expect = 2e-20 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | ||| |||| ||||||| ||||||||| Sbjct 39805 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 39864 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | | |||| ||| ||||||||| || |||| |||| |||||||| || Sbjct 39865 GATCATGACCCTTTGTTCCCACCATTGTAGCACATGTGTCGCCCAGGGCATAAGGGGCAC 39924 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||| ||||||||||| |||||||||||| || |||| Sbjct 39925 GATGACGTGACGTCATCCTCACCTTCCTCCGACTTATCAC 39964 >seq25839 Length=100628 Score = 100 bits (110), Expect = 2e-19 Identities = 119/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 4 AGTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCGGG 62 |||||||| || ||||| | ||| | ||| ||| ||| ||||||| |||| ||||| Sbjct 89019 AGTTGCAGCCTGCAATCTGAACTGAGGATGGGTTTT-TGGTGTTAGCTCACCCTTGCGGG 88961 Query 63 TTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATG 122 | ||| || ||| ||||||||| |||||| |||| |||||||| ||| Sbjct 88960 ATTGCGATACTTTGTCCCGACCATTGTAACACGTGTATCGCCCAGGGCATAAGGGGTATG 88901 Query 123 AGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | ||||||||||||||| ||||||||||||| || |||| Sbjct 88900 ATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 88862 >seq24244 Length=67969 Score = 95.1 bits (104), Expect = 1e-17 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 85 ATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACC 144 |||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||||| Sbjct 50507 ATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCACC 50448 Query 145 TTCCTCCGGTTTGTCAC 161 ||||||| || | |||| Sbjct 50447 TTCCTCCAGTATATCAC 50431 >seq21845 Length=43766 Score = 89.7 bits (98), Expect = 4e-16 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 45 TTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCC 104 ||||||| ||||||||| | | | |||| ||| | |||||||| || ||||| ||| Sbjct 30931 TTAGCTCACCCTCGCGGTATCGTGACCCTTTGTCTCGGCCATTGTAGGATGTGTGTTGCC 30872 Query 105 CTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCC 151 | | ||||| || ||||| ||||||||| ||||| ||||||||||| Sbjct 30871 CAAGGCATAAAGGGCATGATGACTTGACGCCATCCTCACCTTCCTCC 30825 >seq25111 Length=93932 Score = 87.8 bits (96), Expect = 1e-15 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 36 TTTCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACG 95 ||| |||| ||| ||| | ||||| || | ||| |||| ||| ||||||||| ||| Sbjct 63637 TTTTTGGGGTTACCTCACTCTCGCAGGATCGCGACCCTTTGTCCTAACCATTGTAGCACG 63578 Query 96 TGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTT 155 |||| |||| |||||||| ||| | ||||||||||||||| |||||| ||| | | Sbjct 63577 TGTGTCGCCCAGGGCATAAGGGGCATAATGACTTGACGTCATCCTCACCTTTCTCTGACT 63518 Query 156 TGTCAC 161 | |||| Sbjct 63517 TATCAC 63512 >seq24120 Length=66304 Score = 80.6 bits (88), Expect = 2e-13 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| ||||||| | | ||||||||||||||| |||||||| ||||||||| Sbjct 51348 CCATTGTAGCACGTGTGTATCATAACCCATAAGGGCCATATAGACTTGACATCATCCCCA 51407 Query 143 CCTTCCTCCGGTTTGTCAC 161 ||||||||| || | |||| Sbjct 51408 CCTTCCTCCAGTATATCAC 51426 >seq23024 Length=54025 Score = 73.4 bits (80), Expect = 3e-11 Identities = 57/68 (84%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 93 ACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 ||||||| |||| |||||||| ||||| ||||||||||||||| |||||||||||| Sbjct 44348 ACGTGTGTCGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCG 44407 Query 153 GTTTGTCA 160 | || ||| Sbjct 44408 GCTTATCA 44415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415863491810